Pharmacokinetics: Drug metabolism

Last updated: November 01, 2022

Pharmacokinetics: Drug metabolism

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Pharmacokinetics: Drug absorption and distribution
Pharmacokinetics: Drug metabolism
Pharmacokinetics: Drug elimination and clearance
Pharmacodynamics: Drug-receptor interactions
Sympathetic nervous system
Parasympathetic nervous system
Adrenergic receptors
Cholinergic receptors
Cholinomimetics: Direct agonists
Cholinomimetics: Indirect agonists (anticholinesterases)
Muscarinic antagonists
Opioid agonists, mixed agonist-antagonists and partial agonists
Opioid antagonists
Sympathomimetics: Direct agonists
Nervous system anatomy and physiology
Anatomy and physiology of the eye
Anatomy and physiology of the ear
Neuron action potential
Anatomy and physiology of the female reproductive system
Body fluid compartments
Movement of water between body compartments
Renal clearance
Staphylococcus aureus
Staphylococcus epidermidis
Staphylococcus saprophyticus
Streptococcus pneumoniae
Streptococcus pyogenes (Group A Strep)
Streptococcus agalactiae (Group B Strep)
Streptococcus viridans
Enterococcus
Clostridium perfringens
Clostridium botulinum (Botulism)
Clostridium difficile (Pseudomembranous colitis)
Clostridium tetani (Tetanus)
Listeria monocytogenes
Bacillus anthracis (Anthrax)
Bacillus cereus (Food poisoning)
Corynebacterium diphtheriae (Diphtheria)
Nocardia
Actinomyces israelii
Escherichia coli
Salmonella (non-typhoidal)
Salmonella typhi (typhoid fever)
Pseudomonas aeruginosa
Enterobacter
Bartonella henselae (Cat-scratch disease and Bacillary angiomatosis)
Klebsiella pneumoniae
Shigella
Proteus mirabilis
Yersinia enterocolitica
Legionella pneumophila (Legionnaires disease and Pontiac fever)
Serratia marcescens
Bacteroides fragilis
Yersinia pestis (Plague)
Helicobacter pylori
Vibrio cholerae (Cholera)
Campylobacter jejuni
Neisseria meningitidis
Neisseria gonorrhoeae
Moraxella catarrhalis
Francisella tularensis (Tularemia)
Bordetella pertussis (Whooping cough)
Brucella
Haemophilus influenzae
Haemophilus ducreyi (Chancroid)
Pasteurella multocida
Mycobacterium tuberculosis (Tuberculosis)
Mycobacterium leprae
Mycoplasma pneumoniae
Chlamydia trachomatis
Chlamydia pneumoniae
Treponema pallidum (Syphilis)
Leptospira
Borrelia burgdorferi (Lyme disease)
Borrelia species (Relapsing fever)
Rickettsia rickettsii (Rocky Mountain spotted fever) and other Rickettsia species
Coxiella burnetii (Q fever)
Ehrlichia and Anaplasma
Gardnerella vaginalis (Bacterial vaginosis)
Abscesses
Sepsis
Epstein-Barr virus (Infectious mononucleosis)
Herpes simplex virus
Cytomegalovirus
Varicella zoster virus
Human herpesvirus 8 (Kaposi sarcoma)
Human herpesvirus 6 (Roseola)
Adenovirus
Parvovirus B19
Hepatitis D virus
Human papillomavirus
Poxvirus (Smallpox and Molluscum contagiosum)
JC virus (Progressive multifocal leukoencephalopathy)
BK virus (Hemorrhagic cystitis)
Coxsackievirus
Poliovirus
Rhinovirus
Viral hepatitis: Clinical
Influenza virus
Measles virus
Mumps virus
Respiratory syncytial virus
Human parainfluenza viruses
West Nile virus
Dengue virus
Yellow fever virus
Zika virus
Hepatitis C virus
Viral hepatitis: Pathology review
Norovirus
Rotavirus
Coronaviruses
Human T-lymphotropic virus
Ebola virus
Rabies virus
Rubella virus
Eastern and Western equine encephalitis virus
Lymphocytic choriomeningitis virus
Hantavirus
Prions (Spongiform encephalopathy)
Histoplasmosis
Blastomycosis
Coccidioidomycosis and paracoccidioidomycosis
Candida
Aspergillus fumigatus
Cryptococcus neoformans
Mucormycosis
Pneumocystis jirovecii (Pneumocystis pneumonia)
Sporothrix schenckii
Malassezia (Tinea versicolor and Seborrhoeic dermatitis)
Plasmodium species (Malaria)
Babesia
Giardia lamblia
Entamoeba histolytica (Amebiasis)
Cryptosporidium
Acanthamoeba
Toxoplasma gondii (Toxoplasmosis)
Naegleria fowleri (Primary amebic meningoencephalitis)
Trypanosoma cruzi (Chagas disease)
Trypanosoma brucei
Trichomonas vaginalis
Leishmania
Strongyloides stercoralis
Enterobius vermicularis (Pinworm)
Ascaris lumbricoides
Trichinella spiralis
Guinea worm (Dracunculiasis)
Angiostrongylus (Eosinophilic meningitis)
Onchocerca volvulus (River blindness)
Wuchereria bancrofti (Lymphatic filariasis)
Loa loa (Eye worm)
Toxocara canis (Visceral larva migrans)
Ancylostoma duodenale and Necator americanus
Anisakis
Trichuris trichiura (Whipworm)
Diphyllobothrium latum
Echinococcus granulosus (Hydatid disease)
Schistosomes
Clonorchis sinensis
Paragonimus westermani
Sarcoptes scabiei (Scabies)
Pediculus humanus and Phthirus pubis (Lice)
Sensitivity and specificity
Positive and negative predictive value
Test precision and accuracy
Incidence and prevalence
Relative and absolute risk
Odds ratio
Attributable risk (AR)
Mortality rates and case-fatality
DALY and QALY
Direct standardization
Indirect standardization
Ecologic study
Cross sectional study
Case-control study
Cohort study
Randomized control trial
Sample size
Placebo effect and masking
Disease causality
Selection bias
Information bias
Confounding
Interaction
Modes of infectious disease transmission
Outbreak investigations
Disease surveillance
Vaccination and herd immunity
Pelvic inflammatory disease
Breast cancer
DiGeorge syndrome
Ataxia-telangiectasia
HIV (AIDS)
Chronic granulomatous disease

Transcript

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Pharmacokinetics refers to the movement and modification of medication inside the body. Or more simply, it’s what the body does to the medication and how it does it.

Alright, so once the medication get administered, it first has to be absorbed into the circulation, then distributed to various tissues throughout the body; metabolized or broken down; and finally, eliminated or excreted in the urine or feces.

You can remember this as ADME - Absorption, Distribution, Metabolism, and Excretion.

Okay, let’s focus on the metabolism. This is the process of converting a medication into a less, or more active form. These forms are also known as metabolites.

So in most cases, metabolic reactions turn an active medication into a less active, or inactive metabolite, which is then ready to get excreted.

Some medications though, are administered in an inactive form, also known as a prodrug, which needs to be metabolized into an active form within the body before they can produce the desired effect. But even those medications will eventually need to go through further metabolism in order to get inactivated and excreted.

Now, all these reactions are broken down into two main phases: phase I and phase II.

This classification is somewhat misleading though. For some medications Phase II may occur before Phase I, while others may undergo only Phase I or only Phase II.

In any case, both phases take place primarily in the liver, and to a much lesser degree, in the lungs, kidneys, and the walls of the small intestine.

So, let’s zoom into a liver cell, also known as a hepatocyte.

Phase I reactions are typically carried out by a class of enzymes called cytochrome P450, or CYP450 for short.

These enzymes hang out mainly in cell compartments, like the endoplasmic reticulum and the mitochondria.

They are often abbreviated as CYP followed by a number, which indicates the family; followed by a letter for the subfamily, and then a number again for the form, like CYP3A4 or CYP2D6.

What these enzymes do is convert non-polar, lipid-soluble medications into slightly more polar, water-soluble metabolites through oxidation, hydrolysis, or reduction.

Okay, let’s move on to Phase II reactions. These are conjugation reactions, meaning that the medications or metabolites are conjugated, or joined with another compound - like a methyl, acetyl, or sulfa group; glutathione; or glucuronic acid - so they include methylation, acetylation, sulfation, glutathionylation and glucuronidation.

These reactions create highly polar, water- soluble metabolites that cannot diffuse through cell membranes very easily, so they are trapped in the urine and eliminated by the kidneys.

Alright, there’s a huge variability in the rate of these metabolic reactions.

So first of all, this is due to the genetic variability between individuals. This means that, because of their genetic makeup, some people, known as poor metabolizers, have fewer enzymes, or enzymes that work more slowly and less effectively against certain medications.

So, these medications tend to build up in the body, resulting in dangerous side effects.

Sources

  1. "Katzung & Trevor's Pharmacology Examination and Board Review,12th Edition" McGraw-Hill Education / Medical (2018)
  2. "Rang and Dale's Pharmacology" Elsevier (2019)
  3. "Clinical Studies on Drug–Drug Interactions Involving Metabolism and Transport: Methodology, Pitfalls, and Interpretation" Clinical Pharmacology & Therapeutics (2019)
  4. "Understanding drug–drug interaction and pharmacogenomic changes in pharmacokinetics for metabolized drugs" Journal of Pharmacokinetics and Pharmacodynamics (2019)
  5. "Pharmacokinetics in Drug Discovery" Journal of Pharmaceutical Sciences (2008)
  6. "Impact of Drug Transporter Studies on Drug Discovery and Development" Pharmacological Reviews (2003)
  7. "Multidrug resistance-associated proteins: Export pumps for conjugates with glutathione, glucuronate or sulfate" BioFactors (2003)
  8. "Goodman and Gilman's The Pharmacological Basis of Therapeutics, 13th Edition" McGraw-Hill Education / Medical (2017)