Cohort study

11,420views

Cohort study

Watch later

Watch later

Human herpesvirus 8 (Kaposi sarcoma)
Herpes simplex virus
Human herpesvirus 6 (Roseola)
Adenovirus
Parvovirus B19
Human papillomavirus
BK virus (Hemorrhagic cystitis)
JC virus (Progressive multifocal leukoencephalopathy)
Poliovirus
Coxsackievirus
Rhinovirus
Hepatitis A and Hepatitis E virus
Influenza virus
Mumps virus
Measles virus
Respiratory syncytial virus
Human parainfluenza viruses
Yellow fever virus
Zika virus
Hepatitis C virus
West Nile virus
Norovirus
Rotavirus
HIV (AIDS)
Rabies virus
Rubella virus
Prions (Spongiform encephalopathy)
Candida
Plasmodium species (Malaria)
Trypanosoma cruzi (Chagas disease)
Protein synthesis inhibitors: Aminoglycosides
Antimetabolites: Sulfonamides and trimethoprim
Antituberculosis medications
Miscellaneous cell wall synthesis inhibitors
Protein synthesis inhibitors: Tetracyclines
Cell wall synthesis inhibitors: Penicillins
Miscellaneous protein synthesis inhibitors
Cell wall synthesis inhibitors: Cephalosporins
DNA synthesis inhibitors: Metronidazole
DNA synthesis inhibitors: Fluoroquinolones
Mechanisms of antibiotic resistance
Integrase and entry inhibitors
Nucleoside reverse transcriptase inhibitors (NRTIs)
Protease inhibitors
Hepatitis medications
Non-nucleoside reverse transcriptase inhibitors (NNRTIs)
Neuraminidase inhibitors
Herpesvirus medications
Azoles
Echinocandins
Miscellaneous antifungal medications
Anthelmintic medications
Antimalarials
Anti-mite and louse medications
Nuclear structure
DNA structure
Transcription of DNA
Translation of mRNA
Gene regulation
Epigenetics
Amino acids and protein folding
Nucleotide metabolism
DNA replication
Lac operon
DNA damage and repair
Cell cycle
Mitosis and meiosis
DNA mutations
Lesch-Nyhan syndrome
Adenosine deaminase deficiency
Purine and pyrimidine synthesis and metabolism disorders: Pathology review
Polymerase chain reaction (PCR) and reverse-transcriptase PCR (RT-PCR)
Gel electrophoresis and genetic testing
ELISA (Enzyme-linked immunosorbent assay)
Karyotyping
DNA cloning
Fluorescence in situ hybridization
Mendelian genetics and punnett squares
Hardy-Weinberg equilibrium
Inheritance patterns
Independent assortment of genes and linkage
Evolution and natural selection
Down syndrome (Trisomy 21)
Edwards syndrome (Trisomy 18)
Patau syndrome (Trisomy 13)
Fragile X syndrome
Huntington disease
Myotonic dystrophy
Friedreich ataxia
Turner syndrome
Klinefelter syndrome
Prader-Willi syndrome
Angelman syndrome
Cri du chat syndrome
Williams syndrome
Alagille syndrome (NORD)
Achondroplasia
Polycystic kidney disease
Familial adenomatous polyposis
Familial hypercholesterolemia
Marfan syndrome
Multiple endocrine neoplasia
Neurofibromatosis
Tuberous sclerosis
von Hippel-Lindau disease
Albinism
Cystic fibrosis
Gaucher disease (NORD)
Glycogen storage disease type I
Glycogen storage disease type II (NORD)
Hemochromatosis
Mucopolysaccharide storage disease type 1 (Hurler syndrome) (NORD)
Leukodystrophy
Niemann-Pick disease types A and B (NORD)
Niemann-Pick disease type C
Phenylketonuria (NORD)
Sickle cell disease (NORD)
Tay-Sachs disease (NORD)
Alpha-thalassemia
Beta-thalassemia
Wilson disease
Alport syndrome
X-linked agammaglobulinemia
Fabry disease (NORD)
Glucose-6-phosphate dehydrogenase (G6PD) deficiency
Hemophilia
Mucopolysaccharide storage disease type 2 (Hunter syndrome) (NORD)
Muscular dystrophy
Wiskott-Aldrich syndrome
Mitochondrial myopathy
Autosomal trisomies: Pathology review
Muscular dystrophies and mitochondrial myopathies: Pathology review
Miscellaneous genetic disorders: Pathology review
Human development days 1-4
Human development days 4-7
Human development week 2
Human development week 3
Ectoderm
Mesoderm
Endoderm
Development of the placenta
Development of the fetal membranes
Development of twins
Hedgehog signaling pathway
Development of the digestive system and body cavities
Development of the umbilical cord
Development of the cardiovascular system
Fetal circulation
Development of the face and palate
Pharyngeal arches, pouches, and clefts
Development of the gastrointestinal system
Development of the teeth
Development of the tongue
Development of the axial skeleton
Development of the muscular system
Development of the renal system
Development of the reproductive system
Development of the respiratory system
Cellular structure and function
Cell membrane
Selective permeability of the cell membrane
Extracellular matrix
Cell-cell junctions
Endocytosis and exocytosis
Osmosis
Resting membrane potential
Nernst equation
Cytoskeleton and intracellular motility
Cell signaling pathways
Adrenoleukodystrophy (NORD)
Zellweger spectrum disorders (NORD)
Ehlers-Danlos syndrome
Peroxisomal disorders: Pathology review
Introduction to biostatistics
Types of data
Probability
Mean, median, and mode
Range, variance, and standard deviation
Standard error of the mean (Central limit theorem)
Normal distribution and z-scores
Paired t-test
Two-sample t-test
Hypothesis testing: One-tailed and two-tailed tests
One-way ANOVA
Two-way ANOVA
Repeated measures ANOVA
Correlation
Methods of regression analysis
Linear regression
Logistic regression
Type I and type II errors
Sensitivity and specificity
Positive and negative predictive value
Test precision and accuracy
Incidence and prevalence
Relative and absolute risk
Odds ratio
Mortality rates and case-fatality
DALY and QALY
Direct standardization
Indirect standardization
Study designs
Ecologic study
Cross sectional study
Case-control study
Cohort study
Randomized control trial
Clinical trials
Sample size
Disease causality
Selection bias
Information bias
Confounding
Interaction
Prevention
Major depressive disorder
Suicide
Bipolar and related disorders
Major depressive disorder with seasonal pattern
Generalized anxiety disorder
Social anxiety disorder
Panic disorder
Phobias
Obsessive-compulsive disorder
Body focused repetitive disorders
Post-traumatic stress disorder
Schizophrenia
Delirium
Amnesia
Dissociative disorders
Anorexia nervosa
Bulimia nervosa
Cluster A personality disorders
Cluster B personality disorders
Cluster C personality disorders
Somatic symptom disorder
Factitious disorder
Tobacco use disorder
Opioid use disorder
Cannabis use disorder
Cocaine use disorder
Alcohol use disorder
Bruxism
Insomnia
Narcolepsy (NORD)
Erectile dysfunction
Attention deficit hyperactivity disorder
Disruptive, impulse control, and conduct disorders
Learning disability
Fetal alcohol syndrome
Tourette syndrome
Autism spectrum disorder
Rett syndrome
Mood disorders: Pathology review
Amnesia, dissociative disorders and delirium: Pathology review
Personality disorders: Pathology review
Eating disorders: Pathology review
Psychological sleep disorders: Pathology review
Psychiatric emergencies: Pathology review
Drug misuse, intoxication and withdrawal: Hallucinogens: Pathology review
Malingering, factitious disorders and somatoform disorders: Pathology review
Trauma- and stress-related disorders: Pathology review
Selective serotonin reuptake inhibitors
Serotonin and norepinephrine reuptake inhibitors
Tricyclic antidepressants
Monoamine oxidase inhibitors
Atypical antidepressants
Typical antipsychotics
Atypical antipsychotics
Lithium
Nonbenzodiazepine anticonvulsants
Anticonvulsants and anxiolytics: Barbiturates
Anticonvulsants and anxiolytics: Benzodiazepines
Psychomotor stimulants

Transcript

Watch video only

A group of people who share a common characteristic is called a cohort.

For example, people born in the year 1981 make up a birth cohort, and people who work in construction make up an occupational cohort.

Now, cohort studies or longitudinal studies are a type of study design that follows a cohort of people over time to figure out if there’s an association between an exposure and an outcome.

Typically, cohort studies look at individuals in a cohort who have a certain exposure, as well as individuals in a cohort who have not had that exposure, to compare their rates of a certain outcome in the future.

For example, let’s say we want to figure out if there’s a relationship between smoking cigarettes and developing lung cancer.

To do this, we could follow 100,000 individuals that smoke cigarettes, the exposed group, and 100,000 individuals that don’t smoke cigarettes, the non-exposed group, for ten years.

After ten years, let’s say that 82 of the 100,000 people - 0.082% - who smoked developed lung cancer, and only 3 of the 100,000 people - 0.003% - who didn’t smoke developed lung cancer.

We can then compare the groups by dividing the probability of lung cancer for people who smoked - 0.00082 - by the probability of lung cancer for people who didn’t smoke - 0.00003 - and determine that people that smoked had 27 times the risk of developing lung cancer during that ten period.

As it turns out, smoking is the number one risk factor of most types of lung cancer, and people who smoke are 15 to 30 times more likely to develop lung cancer than people who don’t smoke.

Now, there are two main types of cohort studies.

The first type is called prospective cohort or concurrent cohort, because individuals are followed forward in time.

An example would be if in 2018 a group of smokers and a group of non-smokers are recruited for the study.

Then the two groups are followed for ten years, until 2028, and the number of people who develop lung cancer is compared between the two groups.

Prospective cohort studies are the most common type of cohort study, and are what people usually think of when they hear about a “cohort study”.

The other type of cohort study is a retrospective cohort study, also called historical or non-concurrent cohort study.

In retrospective cohort studies, participants are recruited in the past and then followed until the present day.

This can be done either with time-travel or by simply by looking at medical records from the past.

For example, you might look at medical records to find a cohort of young adults in 2008 and then divide them into a group of people that smoke cigarettes, the exposed group, and a group of people that don’t smoke cigarettes, the non-exposed group.

Then we can follow the medical records of these individuals over the next ten years, until 2018, and compare the number of individuals in each group who develop lung cancer.

So even though retrospective cohort studies use data from the past, they still have the same basic structure as prospective cohort studies.

In other words, they still start with a cohort of exposed and non-exposed individuals and follow them over time to assess their outcomes.

Now, this is different from case-control studies, which start with individuals who do or don’t have the outcome, and then use data to investigate past exposures.

This can get a bit confusing because case-control studies are sometimes called retrospective studies, and cohort studies can be either prospective cohort or retrospective cohort studies.

One advantage of cohort studies is that they’re able to clearly show the timing or temporality of the relationship between the exposure and the outcome.

For example, out of 200 people, 100 that smoke and 100 that don’t smoke, none of them have lung cancer at the beginning of the study.

But after ten years, more individuals that smoke develop lung cancer compared to individuals that don’t smoke, so it’s pretty clear that smoking happened first and lung cancer happened second.

Because of this, cohort studies are usually preferred over other study designs, like cross-sectional studies, which measure the outcome and the exposure at the exact same time.

Key Takeaways

A cohort study is a study that helps to determine a relationship between an exposure and a future outcome. In cohort studies, a group of people with a specific characteristic, such as exposure to a particular substance, are followed over time to see if they develop a specific disease or health outcome.

Cohort studies can be either prospective or retrospective. In prospective cohort studies, also known as concurrent cohort studies, individuals are followed forward in time, and the number of people who develop a particular outcome gets compared between the two groups. Next, we have retrospective cohort studies, also called historical or non-concurrent cohort studies. In retrospective cohort studies, two groups of individuals are selected in the past and followed up until the present day. Comparing two groups determines the number of individuals in each group who develop a particular outcome.