Crypt Abscess

What Is It, Causes, Diagnosis, and More

Author: Nikol Natalia Armata, MD
Editor: Alyssa Haag, MD
Editor: Ahaana Singh
Editor: Kelsey LaFayette, DNP, ARNP, FNP-C
Editor: Lily Guo, MD
Illustrator: Jillian Dunbar
Copyeditor: Joy Mapes
Modified: Dec 30, 2024

What is a crypt abscess?

Crypt abscesses are the accumulation of inflammatory cells within crypts, which are tube-like glands found in the lining of the gastrointestinal system, most commonly the colon. The accumulation of inflammatory cells can cause damage to the surrounding cells, thereby preventing the gland from functioning properly and secreting various substances.  

There are two types of crypt abscesses: neutrophilic and apoptotic crypt abscessNeutrophilic crypt abscesses consist of neutrophils, a type of white blood cell responsible for protecting the body from various infections. Apoptotic crypt abscesses are collections of apoptotic cells, which are cells that have undergone programmed cell death.  

An infographic detailing the background, diagnosis, and treatment of crypt abscesses.

What causes a crypt abscess?

Neutrophilic crypt abscesses form as a response to active inflammation, such as during an infection like due to salmonella, shigella, or Clostridioides difficile, or inflammatory bowel disease (IBD). IBD refers to a group of conditions that are characterized by long-term inflammation of the gastrointestinal tract, including Crohn disease and ulcerative colitis. Though neutrophilic crypt abscesses can be found in various gastrointestinal conditions, they are a hallmark of ulcerative colitis 

Apoptotic crypt abscesses can occur as a result of graft-versus-host disease, a condition that may affect those who have undergone hematopoietic stem cell transplantation (HSCT), a procedure whereby diseased cells in the bone marrow are replaced with healthy stem cells. The T cells from the donor may attack the recipient’s gastrointestinal lining, resulting in apoptotic crypt abscesses. Individuals with colon cancer that undergo radiation of the colon or receive chemotherapy treatment such as 5-fluorouracil or methotrexate, can later develop crypt abscesses. Other medications, such as the immunosuppressant mycophenolate mofetil, can increase cellular apoptosis, resulting in the formation of apoptotic crypt abscesses.  

How is a crypt abscess diagnosed and treated?

A crypt abscess can be diagnosed histologically, during which a biopsy, or sample, of the gastrointestinal tract is examined under a microscope. Usually, biopsy samples are obtained during a colonoscopy, an endoscopic examination of the large intestine and rectum 

Treatment of a crypt abscess involves diagnosing and treating the underlying cause. For infectious etiologies, antibiotics like metronidazole or ciprofloxacin are often prescribed. Treatment of cases resulting from IBD may depend on the severity of the disease. 5-aminosalicylic acid compounds, including mesalamine or sulfasalazine, administered orally or as an enema or suppository, are used to treat ulcerative colitis. In more severe cases, oral corticosteroids like prednisone may be initiated. Individuals who don’t respond to treatment with oral medication may require hospitalization in order to initiate intravenous administration of steroids.  

Individuals with colon cancer or others who experience complications of crypt abscesses, such as severe hemorrhage, development of fistulas (i.e., connection between two parts of the body that typically don’t connect), or enlargement of the abscess, usually undergo surgical excision of the colon 

When the formation of crypt abscesses is associated with certain medications, clinicians may recommend discontinuing the use of those medications.  

Less frequently, small crypt abscesses with no complications may resolve on their own. 

What are the most important facts to know about a crypt abscess?

Crypt abscesses are the accumulation of inflammatory cells within the crypts of the gastrointestinal tract. There are two types of crypt abscesses: neutrophilic and apoptotic. The main causes of crypt abscesses include infections and inflammatory bowel disease, which in acute inflammation. Less frequently, crypt abscesses are associated with previous colon radiation and certain medications. When diagnosing a crypt abscess, biopsy is necessary. The treatment largely depends on the underlying cause.  

Summary At A Glance

What is a crypt abscess?Accumulation of inflammatory cells within crypts, which are tube-like glands found in the lining of the gastrointestinal system.
CausesNeutrophilic: Infection, IBD. Apoptotic: GVHD, colon cancer, certain medications. 
DiagnosisHistologically. 
TreatmentTreat underlying cause. 

References


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Sokol H, Vasquez N, Hoyeau-Idrissi N, Seksik P, Beaugerie L, Lavergne-Slove A, Pochart P, Marteau P. Crypt abscess-associated microbiota in inflammatory bowel disease and acute self-limited colitis. World J Gastroenterol. 2010 Feb 7;16(5):583-7. doi: 10.3748/wjg.v16.i5.583. PMID: 20128026; PMCID: PMC2816270. 


Talmon G, Manasek T, Miller R, Muirhead D, Lazenby A. The apoptotic crypt abscess: An underappreciated histologic finding in gastrointestinal pathology. Am J Clin Pathol. 2017;148(6):538-544. doi:10.1093/ajcp/aqx100. 


Yanai S, Toya Y, Sugai T, Matsumoto T. Gastrointestinal adverse events induced by immune-checkpoint inhibitors. Digestion. 2021;102(6):965-973. doi: 10.1159/000518543. Epub 2021 Sep 2. PMID: 34515105.