Infectious gastroenteritis (subacute) (pediatrics): Clinical sciences

Last updated: May 06, 2025

Infectious gastroenteritis (subacute) (pediatrics): Clinical sciences

STAGE DE PÉDIATRIE

STAGE DE PÉDIATRIE

Henoch-Schonlein purpura: Clinical sciences
Approach to inborn errors of metabolism (progressive or chronic): Clinical sciences
Meningitis (pediatrics): Clinical sciences
Approach to anemia in the newborn and infant (destruction and blood loss): Clinical sciences
Approach to anemia in the newborn and infant (underproduction): Clinical sciences
Approach to anemia (destruction and sequestration): Clinical sciences
Approach to anemia (underproduction): Clinical sciences
Sickle cell disease: Clinical sciences
Sepsis (pediatrics): Clinical sciences
Approach to constipation (pediatrics): Clinical sciences
Approach to a cough (pediatrics): Clinical sciences
Bronchiolitis: Clinical sciences
Pneumonia (pediatrics): Clinical sciences
Upper respiratory tract infections: Clinical sciences
Influenza: Clinical sciences
Croup and epiglottitis: Clinical sciences
Congestive heart failure: Clinical sciences
Asthma: Clinical sciences
Approach to diarrhea (pediatrics): Clinical sciences
Infectious gastroenteritis (acute) (pediatrics): Clinical sciences
Infectious gastroenteritis (subacute) (pediatrics): Clinical sciences
Approach to a fever (over 2 months): Clinical sciences
Osteomyelitis (pediatrics): Clinical sciences
Pharyngitis, peritonsillar abscess, and retropharyngeal abscess (pediatrics): Clinical sciences
Otitis media and externa (pediatrics): Clinical sciences
Septic arthritis and transient synovitis (pediatrics): Clinical sciences
Stevens-Johnson syndrome and toxic epidermal necrolysis: Clinical sciences
Urinary tract infection (pediatrics): Clinical sciences
Approach to viral exanthems (pediatrics): Clinical sciences
Approach to bacterial causes of fever and rash (pediatrics): Clinical sciences
Juvenile idiopathic arthritis: Clinical sciences
Kawasaki disease: Clinical sciences
Acute group A streptococcal infections and sequelae (pediatrics): Clinical sciences
Approach to congenital infections: Clinical sciences
Staphylococcal scalded skin syndrome and impetigo: Clinical sciences
Approach to head and neck masses (pediatrics): Clinical sciences
Periorbital and orbital cellulitis (pediatrics): Clinical sciences
Approach to a murmur (pediatrics): Clinical sciences
Approach to congenital heart diseases (cyanotic): Clinical sciences
Approach to hematuria (pediatrics): Clinical sciences
Nephritic syndromes (pediatrics): Clinical sciences
Approach to leukocoria (pediatrics): Clinical sciences
Hepatitis B: Clinical sciences
Approach to a limp (pediatrics): Clinical sciences
Approach to common musculoskeletal injuries (pediatrics): Clinical sciences
Developmental dysplasia of the hip: Clinical sciences
Legg-Calve-Perthes disease and slipped capital femoral epiphysis: Clinical sciences
Human immunodeficiency virus (HIV) infection: Clinical sciences
Approach to proteinuria (pediatrics): Clinical sciences
Approach to a red eye: Clinical sciences
Conjunctival disorders: Clinical sciences
Eyelid disorders: Clinical sciences
Approach to vomiting (newborn and infant): Clinical sciences
Approach to vomiting (pediatrics): Clinical sciences
Gastroesophageal reflux disease (pediatrics): Clinical sciences
Approach to increased intracranial pressure: Clinical sciences
Peptic ulcers, gastritis, and duodenitis (pediatrics): Clinical sciences
Large bowel obstruction: Clinical sciences
Small bowel obstruction: Clinical sciences
Approach to acid-base disorders: Clinical sciences
Approach to metabolic acidosis: Clinical sciences
Approach to metabolic alkalosis: Clinical sciences
Approach to respiratory acidosis: Clinical sciences
Approach to respiratory alkalosis: Clinical sciences
Approach to hypocalcemia (pediatrics): Clinical sciences
Approach to hypoglycemia (pediatrics): Clinical sciences
Approach to hypernatremia (pediatrics): Clinical sciences
Approach to hyponatremia (pediatrics): Clinical sciences
Adrenal insufficiency: Clinical sciences
Syndrome of inappropriate antidiuretic hormone secretion: Clinical sciences
Approach to a fever (0-60 days): Clinical sciences
Approach to hypotonia (newborn and infant): Clinical sciences
Approach to jaundice (newborn and infant): Clinical sciences
Approach to poor feeding (newborn and infant): Clinical sciences
Approach to complications of prematurity (early): Clinical sciences
Approach to complications of prematurity (late): Clinical sciences
Necrotizing enterocolitis: Clinical sciences
Neonatal respiratory distress syndrome: Clinical sciences
Approach to prenatal teratogen exposure: Clinical sciences
Respiratory failure (pediatrics): Clinical sciences
Foreign body aspiration and ingestion (pediatrics): Clinical sciences
Approach to upper airway obstruction (pediatrics): Clinical sciences
Anaphylaxis: Clinical sciences
Approach to epilepsy: Clinical sciences
Approach to a first unprovoked seizure (pediatrics): Clinical sciences
Febrile seizure (pediatrics): Clinical sciences
Diabetes mellitus (pediatrics): Clinical sciences
Dehydration (pediatrics): Clinical sciences
Brief, resolved, unexplained event (BRUE): Clinical sciences
Approach to bradycardia: Clinical sciences
Approach to tachycardia: Clinical sciences
Approach to melena and hematemesis (pediatrics): Clinical sciences
Burns: Clinical sciences
Approach to trauma (pediatrics): Clinical sciences
Approach to a child with Down syndrome (trisomy 21): Clinical sciences
Cystic fibrosis and primary ciliary dyskinesia: Clinical sciences
Approach to delay or regression in developmental milestones: Clinical sciences
Approach to growth faltering: Clinical sciences
Approach to neurodevelopmental disorders: Clinical sciences
Approach to short stature: Clinical sciences
Approach to feeding and eating disorders: Clinical sciences
Allergic rhinitis: Clinical sciences
Essential hypertension: Clinical sciences
Approach to a rash in the well newborn and infant: Clinical sciences
Immunizations (pediatrics): Clinical sciences
Well-child visit (newborn and infant): Clinical sciences
Well-child visit (toddler and child): Clinical sciences
Well-child visit (adolescent): Clinical sciences
Bacterial and viral skin infections: Pathology review
Nasal, oral and pharyngeal diseases: Pathology review
Pediatric musculoskeletal disorders: Pathology review
Viral exanthems of childhood: Pathology review
Seizures: Pathology review
Congenital TORCH infections: Pathology review
Central nervous system infections: Pathology review
Developmental and learning disorders: Pathology review
Breastfeeding
Anatomy clinical correlates: Eye

Decision-Making Tree

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Subacute infectious gastroenteritis refers to an infection of the stomach and intestines that lasts longer than 2 weeks. Gastrointestinal infections typically present with diarrhea after fecal-oral contact or ingestion of contaminated food or water. Most cases of subacute infectious gastroenteritis are caused by either bacteria or parasites.

Now, if a pediatric patient presents with a chief concern suggesting subacute infectious gastroenteritis, first perform an ABCDE assessment to determine if they’re unstable or stable.

If unstable, stabilize their airway, breathing, and circulation. Next, obtain IV access, start IV fluids, and put your patient on continuous vital sign monitoring. Finally, provide supplemental oxygen if needed, and consider starting antibiotics.

Now, let’s return to the ABCDE assessment and take a look at stable patients. Start by obtaining a focused history and physical examination.

History will reveal more than 14 days of diarrhea, possibly in combination with fever, malaise, anorexia, vomiting, and abdominal cramps. The patient might also report a known sick contact or recent travel, and some patients may report weight loss. Finally, the exam may reveal abdominal tenderness. This clinical picture is highly suggestive of subacute infectious gastroenteritis.

To look for the causative pathogen, collect a stool sample and order labs. Depending on the suspected pathogen, you may want to order a stool culture to identify bacterial pathogens; and a stool glutamate dehydrogenase, C. diff toxins A and B, and an nucleic acid amplification test, or NAAT, to look for Clostridioides difficile or C. diff. Additionally, send stool ova and parasites, Giardia and Cryptosporidium antigens, and a Cyclospora examination, to look for parasitic pathogens. First, let’s take a look at findings you’d expect to see in bacterial infection.

In this case, the stool culture might be positive; or C. diff tests like the stool glutamate dehydrogenase antigen test, C. diff toxins A and B, and the NAAT could be positive. Any one of these findings confirms bacterial infection. Let’s look at some common causes, starting with enteroaggregative Escherichia coli, or EAEC for short.

Patients with EAEC infection have watery diarrhea that may contain mucus, or in rare cases, blood. Some patients report recent travel to a developing country. If the stool culture grows EAEC, you can confirm the diagnosis.

Although EAEC infections are usually self-limited, antibiotics can shorten the duration of illness and are indicated for immunocompromised patients or those experiencing prolonged or severe disease. If you decide to treat with antibiotics, choose azithromycin or fluoroquinolone.

Here’s a clinical pearl! For some types of subacute bacterial gastroenteritis, you should avoid antibiotics, since they increase the risk of complications. For example, antibiotics increase the risk of hemolytic uremic syndrome in Shiga-toxin producing E. coli infection; and they can prolong the patient’s carrier state in Salmonella gastroenteritis, keeping them contagious for longer.

Additionally, whether or not your patient gets antibiotics, be sure to recommend an oral rehydration solution as needed, and have them continue a normal diet.

Next, let’s take a look at Clostridioides difficile, or C. diff. Affected patients typically experience fever, bloating, abdominal pain, and occasionally, bloody stools; often after recent antibiotic or PPI use or a hospitalization. The glutamate dehydrogenase antigen test and C. diff toxins A and B will usually be positive, but if results are inconclusive, the NAAT can confirm C. diff infection.

Once you’ve made the diagnosis, discontinue any current antibiotics that might have triggered the infection, and begin treatment with oral vancomycin or oral or intravenous metronidazole.

Here’s a clinical pearl! Antibiotic use can alter the intestinal flora without affecting C. diff, which allows it to multiply and produce toxins that attack the colon wall. This causes severe inflammation with plaque or “pseudomembrane” formation at the site of mucosal injury, which is called pseudomembranous colitis.

Lastly, be sure to recommend an oral rehydration solution as needed, and have them continue a normal diet.

Alright, let’s switch gears and discuss parasitic infection, which is usually caused by Giardia, Cryptosporidium, Cyclospora, or Entamoeba species.

Here, labs will demonstrate positive ova and parasites, a positive Giardia or Cryptosporidium antigen test, or a positive Cyclospora examination. Any of these results confirms parasitic infection.

First, let’s talk about Giardia lamblia, also called Giardia intestinalis or Giardia duodenalis. Infected patients typically experience flatulence and intermittent large-volume, foul-smelling, greasy stools. If history reveals that your patient attends daycare or has been drinking from a stream, and yields a positive Giardia antigen test, confirm giardiasis.

Sources

  1. "2017 Infectious Diseases Society of America Clinical Practice Guidelines for the Diagnosis and Management of Infectious Diarrhea. " Clinical Infectious Diseases. (2017;65(12):e45-e80. )
  2. "Acute gastroenteritis." Pediatr Rev. (2012;33(11):487-495. )
  3. "Gastroenteritis in Children [published correction appears in Am Fam Physician. 2019 Jun 15;99(12):732]. " Am Fam Physician (2019)
  4. "Nelson Textbook of Pediatrics. 21st ed. " Elsevier (2020)
  5. "Nelson Essentials of Pediatrics. 8th ed. " Elsevier (2023)