Viral structure and functions

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Viral structure and functions

Oral Microbiology

Oral Microbiology

Polymerase chain reaction (PCR) and reverse-transcriptase PCR (RT-PCR)
Gel electrophoresis and genetic testing
ELISA (Enzyme-linked immunosorbent assay)
Karyotyping
DNA cloning
Fluorescence in situ hybridization
Light microscopy and staining methods
Introduction to the immune system
Innate immune system
Complement system
T-cell development
B-cell development
MHC class I and MHC class II molecules
T-cell activation
B-cell activation, differentiation, and contraction
Cell-mediated immunity of CD4 cells
Cell-mediated immunity of natural killer and CD8 cells
Antibody classes
Somatic hypermutation and affinity maturation
VDJ rearrangement
Contracting the immune response and peripheral tolerance
B- and T-cell memory
Anergy, exhaustion, and clonal deletion
Vaccinations
Type I hypersensitivity
Type II hypersensitivity
Type III hypersensitivity
Type IV hypersensitivity
Bacterial structure and functions
Staphylococcus epidermidis
Staphylococcus aureus
Staphylococcus saprophyticus
Streptococcus viridans
Streptococcus pneumoniae
Streptococcus pyogenes (Group A Strep)
Streptococcus agalactiae (Group B Strep)
Enterococcus
Clostridium perfringens
Clostridium botulinum (Botulism)
Clostridium difficile (Pseudomembranous colitis)
Clostridium tetani (Tetanus)
Bacillus cereus (Food poisoning)
Listeria monocytogenes
Corynebacterium diphtheriae (Diphtheria)
Bacillus anthracis (Anthrax)
Nocardia
Actinomyces israelii
Escherichia coli
Salmonella (non-typhoidal)
Salmonella typhi (typhoid fever)
Pseudomonas aeruginosa
Enterobacter
Klebsiella pneumoniae
Shigella
Proteus mirabilis
Yersinia enterocolitica
Legionella pneumophila (Legionnaires disease and Pontiac fever)
Serratia marcescens
Bacteroides fragilis
Yersinia pestis (Plague)
Vibrio cholerae (Cholera)
Helicobacter pylori
Campylobacter jejuni
Neisseria meningitidis
Neisseria gonorrhoeae
Moraxella catarrhalis
Francisella tularensis (Tularemia)
Bordetella pertussis (Whooping cough)
Brucella
Haemophilus influenzae
Haemophilus ducreyi (Chancroid)
Pasteurella multocida
Mycobacterium tuberculosis (Tuberculosis)
Mycobacterium leprae
Mycobacterium avium complex (NORD)
Mycoplasma pneumoniae
Chlamydia pneumoniae
Chlamydia trachomatis
Borrelia burgdorferi (Lyme disease)
Borrelia species (Relapsing fever)
Leptospira
Treponema pallidum (Syphilis)
Rickettsia rickettsii (Rocky Mountain spotted fever) and other Rickettsia species
Coxiella burnetii (Q fever)
Ehrlichia and Anaplasma
Gardnerella vaginalis (Bacterial vaginosis)
Viral structure and functions
Varicella zoster virus
Cytomegalovirus
Epstein-Barr virus (Infectious mononucleosis)
Human herpesvirus 8 (Kaposi sarcoma)
Herpes simplex virus
Human herpesvirus 6 (Roseola)
Adenovirus
Parvovirus B19
Hepatitis B and Hepatitis D virus
Human papillomavirus
Poxvirus (Smallpox and Molluscum contagiosum)
BK virus (Hemorrhagic cystitis)
JC virus (Progressive multifocal leukoencephalopathy)
Poliovirus
Coxsackievirus
Rhinovirus
Hepatitis A and Hepatitis E virus
Influenza virus
Mumps virus
Measles virus
Respiratory syncytial virus
Human parainfluenza viruses
Dengue virus
Yellow fever virus
Zika virus
Hepatitis C virus
West Nile virus
Norovirus
Rotavirus
Coronaviruses
HIV (AIDS)
Human T-lymphotropic virus
Ebola virus
Rabies virus
Rubella virus
Eastern and Western equine encephalitis virus
Lymphocytic choriomeningitis virus
Hantavirus
Prions (Spongiform encephalopathy)
Candida
Plasmodium species (Malaria)

Transcript

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Viruses are a unique group of pathogens with a simple acellular organization and a distinct pattern of multiplication.

Despite their simple structure they are a major cause of disease.

They have no cytoplasmic membrane, cytosol, or functional organelles, but they can infect all types of cells, and numerous viruses can also infect bacteria, which are called bacteriophages.

Viruses and bacteriophages are not capable of metabolic activity on their own, so instead, they invade other cells and use their metabolic machinery to produce more viral molecules, nucleic acid and proteins which then assemble into new viruses.

Viruses can exist either extracellularly or intracellularly.

In the extracellular state, the virus is called a virion and isn’t capable of reproducing.

A virion consists of a protein coat, called a capsid, surrounding a nucleic acid core which contains the genetic material or the viral genome.

The nucleic acid and the capsid are collectively called a nucleocapsid.

Some virions have a phospholipid membrane derived from the host cell, called an envelope which surrounds the nucleocapsid.

The viruses that have an envelope are called enveloped viruses and these include the herpesviruses and HIV, while the ones that lack the envelope, such as poliovirus, are called non enveloped or naked viruses.

Once inside the cell, the virus enters the intracellular state, where the capsid is removed and the virus becomes active.

In this state the virus exists solely as nucleic acids that induce the host to synthesize viral components from which virions are assembled and eventually released.

Now, the viruses are surrounded by an outer protein coating called the capsid, which protects the viral genome and aids in its transfer between host cells.

Also, according to their capsid symmetry the viruses can come in many shapes and sizes.

There are three types of shapes: helical, icosahedral, and complex.

First, the helical viruses have a capsid with a central cavity or a hollow tube which is made by proteins arranged in a circular fashion, creating a disc like shape.

The disc shapes are attached helically, creating a tube with room for the nucleic acid in the middle.

An example of a virus with helical symmetry is the tobacco mosaic virus which is the most studied example.

Moving on to the icosahedral viruses which are made up of equilateral triangles fused together in a spherical shape that fully encloses the genetic material.

These viruses are released into the environment when the cell dies, breaks down and lyses, thus releasing the virions.

Key Takeaways

Viruses are a unique type of pathogen that lack cytoplasmic membrane, cytosol, or functional organelles and use the metabolic machinery of host cells to produce more viral molecules. They can exist extracellularly as a virion or intracellularly as nucleic acids that induce the host to synthesize viral components. Viruses come in many shapes and sizes, including helical, icosahedral, and complex. The viral genome can be DNA or RNA, single-stranded or double-stranded, and mutations in RNA viruses occur more frequently than in DNA viruses due to the likelihood of transcription errors by RNA polymerases.