Miscellaneous genetic disorders: Pathology review

Last updated: November 01, 2022

Miscellaneous genetic disorders: Pathology review

Semester 1

Semester 1

Introduction to the skeletal system
Introduction to the muscular system
Anatomical terminology
Anatomy of the breast
Muscles of the thoracic wall
Anatomy clinical correlates: Breast
Introduction to the cranial nerves
Cranial nerve pathways
Anatomy of the thyroid and parathyroid glands
Anatomy of the pelvic girdle
Bones of the vertebral column
Joints of the vertebral column
Muscles of the back
Vessels and nerves of the vertebral column
Anatomy clinical correlates: Bones, joints and muscles of the back
Anatomy clinical correlates: Vertebral canal
Bones of the lower limb
Fascia, vessels and nerves of the lower limb
Anatomy of the anterior and medial thigh
Muscles of the gluteal region and posterior thigh
Vessels and nerves of the gluteal region and posterior thigh
Anatomy of the popliteal fossa
Anatomy of the leg
Anatomy of the foot
Anatomy of the hip joint
Anatomy of the knee joint
Anatomy of the tibiofibular joints
Joints of the ankle and foot
Bones of the upper limb
Fascia, vessels and nerves of the upper limb
Anatomy of the brachial plexus
Anatomy of the pectoral and scapular regions
Anatomy of the arm
Muscles of the forearm
Vessels and nerves of the forearm
Muscles of the hand
Anatomy of the sternoclavicular and acromioclavicular joints
Anatomy of the glenohumeral joint
Anatomy of the elbow joint
Anatomy of the radioulnar joints
Joints of the wrist and hand
Anatomy clinical correlates: Clavicle and shoulder
Anatomy clinical correlates: Axilla
Anatomy clinical correlates: Arm, elbow and forearm
Anatomy clinical correlates: Wrist and hand
Anatomy clinical correlates: Median, ulnar and radial nerves
Suicide
Alcohol use disorder
Glycolysis
Citric acid cycle
Electron transport chain and oxidative phosphorylation
Gluconeogenesis
Glycogen metabolism
Pentose phosphate pathway
Physiological changes during exercise
Amino acid metabolism
Nitrogen and urea cycle
Fatty acid synthesis
Fatty acid oxidation
Ketone body metabolism
Cholesterol metabolism
Pyruvate dehydrogenase deficiency
Glucose-6-phosphate dehydrogenase (G6PD) deficiency
Carbohydrates and sugars
Glycogen storage disease type I
Glycogen storage disease type III
Phenylketonuria (NORD)
Familial hypercholesterolemia
Hypertriglyceridemia
Glycogen storage disorders: Pathology review
Introduction to biostatistics
Probability
Types of data
Hypothesis testing: One-tailed and two-tailed tests
Type I and type II errors
Sensitivity and specificity
Test precision and accuracy
Positive and negative predictive value
Cellular structure and function
Cell membrane
Selective permeability of the cell membrane
Extracellular matrix
Cell-cell junctions
Endocytosis and exocytosis
Osmosis
Resting membrane potential
Nernst equation
Cytoskeleton and intracellular motility
Cell signaling pathways
Zellweger spectrum disorders (NORD)
Adrenoleukodystrophy (NORD)
Ehlers-Danlos syndrome
Osteogenesis imperfecta
Marfan syndrome
Nuclear structure
Transcription of DNA
Gene regulation
Amino acids and protein folding
DNA structure
Translation of mRNA
Epigenetics
Protein structure and synthesis
DNA replication
Nucleotide metabolism
Lac operon
DNA damage and repair
Mitosis and meiosis
Cell cycle
DNA mutations
Adenosine deaminase deficiency
Xeroderma pigmentosum
Purine and pyrimidine synthesis and metabolism disorders: Pathology review
Polymerase chain reaction (PCR) and reverse-transcriptase PCR (RT-PCR)
ELISA (Enzyme-linked immunosorbent assay)
DNA cloning
Gel electrophoresis and genetic testing
Karyotyping
Fluorescence in situ hybridization
Human development days 1-4
Human development days 4-7
Human development week 2
Human development week 3
Ectoderm
Mesoderm
Endoderm
Development of the placenta
Development of the fetal membranes
Hedgehog signaling pathway
Development of the umbilical cord
Development of the axial skeleton
Development of the limbs
Development of the muscular system
Hardy-Weinberg equilibrium
Mendelian genetics and punnett squares
Inheritance patterns
Independent assortment of genes and linkage
Evolution and natural selection
Down syndrome (Trisomy 21)
Edwards syndrome (Trisomy 18)
Patau syndrome (Trisomy 13)
Huntington disease
Turner syndrome
Klinefelter syndrome
Cri du chat syndrome
Achondroplasia
Hereditary spherocytosis
Albinism
Cystic fibrosis
Hemochromatosis
Primary ciliary dyskinesia
Alpha-thalassemia
Beta-thalassemia
Sickle cell disease (NORD)
Hemophilia
Muscular dystrophy
Mitochondrial myopathy
Autosomal trisomies: Pathology review
Muscular dystrophies and mitochondrial myopathies: Pathology review
Miscellaneous genetic disorders: Pathology review
Light microscopy and staining methods
Pituitary gland histology
Thyroid and parathyroid gland histology
Adrenal gland histology
Liver histology
Blood histology
Thymus histology
Spleen histology
Lymph node histology
Skin histology
Bone histology
Skeletal muscle histology
Cartilage histology
Central nervous system histology
Peripheral nervous system histology
Mammary gland histology
Bacterial structure and functions
Viral structure and functions
Pediculus humanus and Phthirus pubis (Lice)
Sarcoptes scabiei (Scabies)
Free radicals and cellular injury
Ischemia
Necrosis and apoptosis
Hypoxia
Amyloidosis
Inflammation
Wound healing
Atrophy, aplasia, and hypoplasia
Hyperplasia and hypertrophy
Metaplasia and dysplasia
Oncogenes and tumor suppressor genes
Conn syndrome
Cushing syndrome
Congenital adrenal hyperplasia
Primary adrenal insufficiency
Hyperaldosteronism
Adrenal cortical carcinoma
Hyperthyroidism
Graves disease
Thyroid storm
Hypothyroidism
Thyroid cancer
Hyperparathyroidism
Hypercalcemia
Hypoparathyroidism
Hypocalcemia
Diabetes mellitus
Hyperpituitarism
Pituitary adenoma
Hyperprolactinemia
Prolactinoma
Gigantism
Acromegaly
Hypopituitarism
Hypoprolactinemia
Diabetes insipidus
Syndrome of inappropriate antidiuretic hormone secretion (SIADH)
Androgen insensitivity syndrome
5-alpha-reductase deficiency
Thyroid nodules and thyroid cancer: Pathology review
Parathyroid disorders and calcium imbalance: Pathology review
Jaundice
Non-alcoholic fatty liver disease
Viral hepatitis
Iron deficiency anemia
Sideroblastic anemia
Anemia of chronic disease
Hemolytic disease of the newborn
Autoimmune hemolytic anemia
Pyruvate kinase deficiency
Aplastic anemia
Megaloblastic anemia
Folate (Vitamin B9) deficiency
Vitamin B12 deficiency
Vitamin K deficiency
Von Willebrand disease
Antithrombin III deficiency
Factor V Leiden
Chronic leukemia
Acute leukemia
Leukemoid reaction
Langerhans cell histiocytosis
Sepsis

Transcript

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At the clinic, 30 year old Linda comes with her 2 year old toddler for a yearly pediatric checkup. Linda tells the pediatrician that, while she was bathing her son, she noticed that his testes are unusually large. Clinical examination confirms enlarged testes, and additionally, the pediatrician noticed dysmorphic facial features including a long, narrow face; prominent forehead and jaw; and large, protruding ears. Later that day, 27 year old Samantha comes to the clinic with her 5 year old son because she noticed that he often has strange episodes of laughter and smiling. In addition, she mentions that he had experienced seizures several months ago.

Based on the clinical findings, the pediatrician concludes that both children have some form of genetic disorder, and orders genetic testing to confirm the diagnosis. Now, let’s go over genetic disorders such as fragile X syndrome, imprinting disorders, Cri-du-chat syndrome, and Williams syndrome.

First, let’s start with fragile X syndrome. This is an X-linked disorder caused by inactivation of the FMR1 gene, which is located on the long arm of the X chromosome. These individuals have over 200 CGG trinucleotide repeats on the FMR1 gene, which leads to its hypermethylation and subsequent inactivation. Fragile X syndrome is the most common cause of inherited intellectual disability, and the second most common cause of genetically associated psychiatric disorders, after Down syndrome. Individuals with fragile X syndrome can have delayed speech and motor development. In addition, individuals may have anxiety disorders, autism, and attention deficit-hyperactivity disorder; as well as mitral valve prolapse. For your exam, it’s important to know the key physical findings of fragile X syndrome includes enlarged testes, also known as macroorchidism; and dysmorphic facial features, like a long narrow face, with large protruding ears, and prominent forehead and jaw. The treatment of fragile X syndrome includes speech, occupational, and physical therapy. Clinicians should also focus on the prevention of common medical problems associated with the disorder such as gastroesophageal reflux, sinusitis, and otitis media.

Now, let’s move on to imprinting disorders. For most genes, both the maternal and paternal copies are expressed. However, certain genes undergo a normal process called genomic imprinting, where they are silenced via methylation depending on which parent passes them down. Some genes are supposed to be silenced if they are passed down the paternal side, and some are silenced only if they come from the maternal side.

Now, imprinting disorders can be caused by defects in the imprinting process, or due to uniparental disomy, which occurs when a person receives two copies of the same chromosome. Now if both chromosomes come from the father, the child won’t have any active paternally imprinted genes associated with that chromosome. Imprinting disorders may occur sporadically, or can be passed down from an asymptomatic parent. Let’s say in this case, a maternal imprinted gene is mutated and does not work. A biological male gets the mutated gene from their mother, but they’ll be asymptomatic since the maternal version is silenced. However if they pass on this mutated gene to their children, they’ll have a paternal version of the gene that’s active and can develop the disease.

Two well known imprinting disorders are Prader-Willi syndrome and Angelman syndrome. It’s important to note that both syndromes involve defects in chromosome 15, but in Prader-Willi syndrome, the maternal gene is imprinted, so the defect usually comes from the paternal gene. On the other hand, in AngelMan syndrome, the paternal gene is normally imprinted so the defect is in the maternal gene.

Sources

  1. "Robbins Basic Pathology" Elsevier (2017)
  2. "Harrison's Principles of Internal Medicine, Twentieth Edition (Vol.1 & Vol.2)" McGraw-Hill Education / Medical (2018)
  3. "Public Health Literature Review of Fragile X Syndrome" Pediatrics (2017)
  4. "‘Puppet’ Children A Report on Three Cases" Developmental Medicine & Child Neurology (2008)
  5. "Preventive Management of Children with Congenital Anomalies and Syndromes" Cambridge University Press (2000)
  6. "Cri du Chat syndrome" Orphanet Journal of Rare Diseases (2006)