Carnitine deficiency diagnosis begins with a detailed clinical evaluation and physical exam, looking for suggestive signs and symptoms. The diagnosis is confirmed by measuring plasma carnitine levels. Low plasma-free carnitine levels (i.e., < 5 μmol/L, average range 20–50 μmol/L) are suggestive of carnitine deficiency. Additionally, genetic testing may be performed to assess alterations of the SLC22A5 gene when primary carnitine deficiency is suspected, however, sequence analysis is not always conclusive. If genetic testing fails to confirm primary carnitine deficiency, the preferred diagnostic test is a functional assay, such as the cultured skin fibroblast carnitine assay. In individuals with primary carnitine deficiency, the activity of the OCTN2 transporter is typically less than 10% of typical control values.
Once the diagnosis of either primary or secondary carnitine deficiency is confirmed, the individual may be advised to undergo a series of investigations including an echocardiogram, electrocardiogram (EKG), serum creatine kinase (CK), serum creatinine (Cr), serum transaminases (i.e., AST, ALT), electrolytes (e.g., sodium, potassium, chloride) and blood sugar levels. Other biochemical tests such as urine testing may be done to measure carnitine levels or carnitine-related metabolites, which can provide additional information about carnitine status and metabolism. Functional tests, such as carnitine loading tests, may be conducted to assess the body's ability to absorb and utilize carnitine. This involves administering a dose of carnitine and measuring carnitine levels in the blood or urine over a specific period. An endoscopy (e.g., gastroscopy, colonoscopy) may be suggested if gastrointestinal disorders are suspected.
In the US, the newborn screening test includes evaluation for carnitine deficiency. However, due to carnitine's ability to cross the placenta, low fetal plasma creatinine levels shortly after birth can reflect the maternal plasma carnitine levels. Some mothers are diagnosed after their infants are detected with carnitine deficiency in their neonatal screening tests. Therefore, if the newborn screening detects low carnitine levels, both the baby and the mother are re-tested after two weeks to determine who has carnitine deficiency.