St. Louis Encephalitis Virus · What It Is, Transmission, Signs, Symptoms, Diagnosis, and More

Published: Dec 02, 2025
Author: Georgina Tiarks, MD
Editor: Alyssa Haag, MD
Editor: Emily Miao, PharmD
Editor: Kelsey LaFayette, DNP, ARNP, FNP-C
Editor: Arianna Succi, MD
Illustrator: Jessica Reynolds, MS
7-day free trial

Go deeper with Osmosis

Osmosis is a learning platform with videos, questions, and AI tools to help you master topics like this.

4.8 · 12,000+ reviews
Watch quick, visual videos
Practice with Qbank-style questions
Use AI to explain, quiz, and review
Study anytime with the mobile app
Start free trial

No credit card · Cancel anytime

What is the St. Louis encephalitis virus?

St. Louis encephalitis (SLE) virus is an arbovirus (i.e., mosquito-borne virus) that is largely asymptomatic but can cause neurological disease. SLE virus is a single-stranded RNA virus belonging to the Flaviviridae family and was first discovered during an epidemic in St. Louis, Missouri, in 1933. Although the disease incidence is low, it can be found throughout North and South America. The highest incidence of SLE is recorded during the summer months, with a peak observed in August.  

Learn deeper with Osmosis

Master this topic faster with videos, questions, and AI.

Used by 8M+ healthcare learners.

Start free trial

No credit card · Cancel anytime

How is St. Louis encephalitis virus transmitted?

St. Louis encephalitis virus may be transmitted through the bite of an infected mosquito. The virus has a mosquito-bird-mosquito transmission cycle, in which birds act as amplifying hosts, allowing the virus to replicate without producing symptoms. In this cycle, mosquitos of the Culex genus are the vectors which transmit the virus when they feed. Humans and animals are considered dead-end hosts that become infected, meaning they cannot transmit the virus to each other or to other animal species. 

Strategies to prevent virus transmission include utilizing mosquito repellent (e.g., DEET, permethrin), wearing protective clothing, and avoiding the outdoors during dawn and dusk. Using screens on windows or mosquito nets over beds can prevent mosquito bites while indoors. Towns can also eliminate standing water sources, which is where mosquitoes tend to breed, and spray insecticides into the air. 

What signs and symptoms does St. Louis encephalitis virus infection cause?

St. Louis encephalitis virus infection causes a range of signs and symptoms, including a flu-like prodrome with fever, headache, fatigue, body aches, and nausea. A small subset of people infected will go on to develop signs of central nervous system dysfunction. Those who do can develop encephalitis (i.e., inflammation of the brain), meningitis (i.e., inflammation of the meninges), with signs including stiff neck, neurologic dysfunction, flaccid paralysis, confusion, dizziness, agitation, tremors, and coma. Immunocompromised individuals and older adults are more at risk of developing severe complications 

The fatality rate can vary anywhere between 5 to 20%, with the highest rate in those 70 years or older. Children and young adults are more likely to have a mild disease course. Between 5 and 10% of individuals show persistent neurological symptoms, including gait and speech disturbances and behavioral problems.   

The incubation period from infection to symptom onset is between 4 to 14 days, though many individuals who are infected may remain asymptomatic. A study indicated that the likely ratio of subclinical (i.e., not presenting detectable signs and symptoms) to clinical cases is 300:1, meaning that many people who are infected with the virus have minimal to no symptoms.  

How is a St. Louis encephalitis virus infection diagnosed and treated?

Diagnosis of St. Louis encephalitis virus infection typically begins with a clinical evaluation, including a review of signs and symptoms and medical history, with particular attention to risk factors for potential exposure to the virus (e.g., living or traveling to an area where it is known to circulate).  Blood work, such as a complete blood count (CBC), is performed to assess for signs of infection (e.g., high lymphocyte count).  

Brain imaging, such as computed tomography (CT) scan or magnetic resonance imaging (MRI), may be used to assess for signs of neurologic dysfunction. A lumbar puncture, performed to collect a cerebrospinal fluid (CSF) sample, may also be necessary if meningeal signs, such as a stiff neck, are present. If SLE virus is present, CSF analysis may reveal a high opening pressure, increased lymphocytes count (i.e., lymphocytic pleocytosis), and an elevated cerebrospinal fluid  protein. An electroencephalography (EEG), a test recording the brains’ electrical activity, can also be performed and may reveal diffuse slowing. 

Once suspicion is high, targeted testing for the SLE virus may be performed. Serologic testing - used to detect SLE virus-specific antibodies in the blood or CSF - is the main method for diagnosing SLE virus encephalitis. Immunoassays such as enzyme-linked immunosorbent assay (ELISA) or indirect immunofluorescence assay (IFA) are typically employed to detect IgM antibodies. If IgM results are positive, more specific confirmatory tests, such as plaque reduction neutralization tests (PRNT), are performed to identify neutralizing antibodies against SLE virus. In the early stages of infection, real-time polymerase chain reaction (RT-PCR) may also be used on serum or CSF samples to directly detect viral RNA. If IgG antibody titers show a four-fold increase, that can also indicate recent infection with the virus. 

There is no antiviral treatment available to treat St. Louis encephalitis. Treatment primarily involves supportive care with intravenous fluids and NSAIDs (e.g., ibuprofen) for pain and fever relief.  

What are the most important facts to know about the St. Louis encephalitis virus?

St. Louis encephalitis virus is a mosquito-borne illness that can cause neurologic dysfunction. Wearing protective clothing, using mosquito repellent, and minimizing outdoor activity during dusk and dawn can help to prevent mosquito bites that may transmit the St. Louis encephalitis virus. Although most people bitten by an infected mosquito remain minimally ill or asymptomatic, some individuals can also develop severe complicationsSymptoms of St. Louis encephalitis may include fatigue, flu-like illness, headaches, encephalitis, meningitis, paralysis, and coma. The disease is generally milder in younger populations, while those with increased age and who are immunocompromised are at higher risk. SLE can be diagnosed with blood tests, imaging studies, a lumbar puncture, and antibody detection. There is no antiviral treatment for SLE, therefore, treatment is primarily supportive. 

Key Takeaways

Definition 
 

St. Louis encephalitis (SLE) virus is a single-stranded, RNA arbovirus belonging to the Flaviviridae family that is largely asymptomatic but can cause neurological disease. Although the disease incidence is low, it can be found throughout North and South America. The highest incidence of SLE is recorded during the summer months, with a peak observed in August.   

Transmission  

- Mosquito-bird-mosquito transmission cycle (birds = amplifying hosts) 

     - Infected mosquitoes (Culex genus) bite humans to feed → transmit the virus  

     - Humans: dead-end hosts  

- Prevention strategies:  

     - Mosquito repellent (DEET, permethrin 

     - Protective clothing  

     - Avoid outdoors during dawn and dusk  

     - Screen on windows 

     - Mosquito nets  

     - Standing water sources elimination  

     - Insecticide spraying   

Signs and Symptoms 

- Many infected individuals remain asymptomatic 

- Flu-like prodrome: fever, headache, fatigue, body aches, nausea  

- Central nervous system involvement: encephalitis, meningitis 

     - Stiff neck, neurologic dysfunction, flaccid paralysis, confusion, dizziness, agitation, tremors, coma  

     - Severe complications more likely in immunocompromised individuals 

- Fatality rate: 5 to 20% (highest rate in >70 years old)  

- Children and young adult: milder disease course  

- Persistent neurological symptoms in 5-10% of individuals  

- Incubation period: 4-14 days 

Diagnosis 

- Clinical evaluation  

     - Attention to risk factors for potential exposure to the virus  

- Blood work (complete blood count 

- Brain imaging (CT scan, MRI)  

- Lumbar puncture  

     - CSF analysis  

- Electroencephalography (EEG)  

- If high suspicion → targeted testing  

     - Serology (of blood or CSF)  

     - Real-time polymerase chain reaction (RT-PCR) 

     - Immunoassays (EILISA, IFA)  

     - Plaque reduction neutralization tests (PRNT) 

Treatment 

- No antiviral treatment available  

- Supportive care (intravenous fluids, NSAIDs) for pain and fever relief  

Students say Osmosis is 100% worth it

Because Osmosis saves them time. Lowers stress. And actually helps them remember when it counts.

I used Osmosis to prepare for my first medical school licensing exam! Super helpful and interactive for people who may not do great with just pages of text info!

Cecilia Ruiz

Cecilia Ruiz

MD student

Sayan Misra

I have used Osmosis for about four years. Best thing I have ever used for my medical studies.

Sayan Misra

Sayan Misra

Med student

Osmosis videos are superior because they define simple concepts, tell a story with a clear progression, and provide context.

Jay Pate

Jay Pate

Dental student

References


Centers for Disease Control and Prevention. Clinical signs and symptoms of St Louis encephalitis. In: CDC Healthcare Provider Information: St Louis Encephalitis. Published 2024. Accessed July 16, 2025. https://www.cdc.gov/sle/hcp/clinical-signs/index.html


Centers for Disease Control and Prevention. St. Louis encephalitis: diagnosis and testing for healthcare providers. Published May 15, 2024. Accessed July 16, 2025. https://www.cdc.gov/sle/hcp/diagnosis-


Centers for Disease Control and Prevention. St. Louis encephalitis: symptoms, diagnosis, and treatment. Published May 15, 2024. Accessed July 16, 2025. https://www.cdc.gov/sle/symptoms-diagnosis-treatment/index.html


Curren EJ, Lindsey NP, Fischer M, Hills SL. St. Louis encephalitis virus disease in the United States, 2003–2017. Am J Trop Med Hyg. 2018;99(4):1074-1079. doi:10.4269/ajtmh.18-0420


Day JF. Predicting St. Louis encephalitis virus epidemics: lessons from recent, and not so recent, outbreaks. Annu Rev Entomol. 2001;46(1):111-138. doi:10.1146/annurev.ento.46.1.111


Diaz A, Coffey LL, Burkett-Cadena N, Day JF. Reemergence of St. Louis encephalitis virus in the Americas. Emerg Infect Dis. 2018;24(12):2150-2157. doi:10.3201/eid2412.180372


Reisen WK. Epidemiology of St. Louis encephalitis virus. In: Chambers TJ, Monath TP, eds. Advances in Virus Research. Vol 61. The Flaviviruses: Detection, Diagnosis, and Vaccine Development. Academic Press; 2003:139-183. doi:10.1016/S0065-3527(03)61004-3