Peroxisomal disorders: Pathology review

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Peroxisomal disorders: Pathology review

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Bones and joints of the thoracic wall
Muscles of the thoracic wall
Vessels and nerves of the thoracic wall
Anatomy of the breast
Anatomy of the pleura
Anatomy of the lungs and tracheobronchial tree
Anatomy of the heart
Anatomy of the coronary circulation
Anatomy of the superior mediastinum
Anatomy of the inferior mediastinum
Anatomy clinical correlates: Thoracic wall
Anatomy clinical correlates: Breast
Anatomy clinical correlates: Pleura and lungs
Anatomy clinical correlates: Heart
Anatomy clinical correlates: Mediastinum
Cranial nerve pathways
Anatomy of the abdominal viscera: Blood supply of the foregut, midgut and hindgut
Anatomy of the pelvic girdle
Anatomy of the pelvic cavity
Anatomy of the urinary organs of the pelvis
Anatomy of the gastrointestinal organs of the pelvis and perineum
Arteries and veins of the pelvis
Vessels and nerves of the vertebral column
Fascia, vessels and nerves of the lower limb
Anatomy of the anterior and medial thigh
Vessels and nerves of the gluteal region and posterior thigh
Fascia, vessels and nerves of the upper limb
Anatomy of the brachial plexus
Anatomy of the pectoral and scapular regions
Anatomy of the arm
Muscles of the forearm
Vessels and nerves of the forearm
Anatomy clinical correlates: Arm, elbow and forearm
Anatomy clinical correlates: Wrist and hand
Superficial structures of the neck: Posterior triangle
Superficial structures of the neck: Cervical plexus
Superficial structures of the neck: Anterior triangle
Anatomy of the larynx and trachea
Anatomy of the pharynx and esophagus
Bones of the cranium
Anatomy of the orbit
Anatomy of the cerebral cortex
Introduction to the cranial nerves
Anatomy of the oculomotor (CN III), trochlear (CN IV) and abducens (CN VI) nerves
Anatomy of the trigeminal nerve (CN V)
Personality disorders: Pathology review
Eating disorders: Pathology review
Selective serotonin reuptake inhibitors
Serotonin and norepinephrine reuptake inhibitors
Tricyclic antidepressants
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Lithium
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Anticonvulsants and anxiolytics: Barbiturates
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Psychomotor stimulants
Glycolysis
Citric acid cycle
Electron transport chain and oxidative phosphorylation
Gluconeogenesis
Glycogen metabolism
Pentose phosphate pathway
Physiological changes during exercise
Amino acid metabolism
Nitrogen and urea cycle
Fatty acid synthesis
Fatty acid oxidation
Ketone body metabolism
Cholesterol metabolism
Type I and type II errors
Clinical trials
Cell signaling pathways
Peroxisomal disorders: Pathology review
Purine and pyrimidine synthesis and metabolism disorders: Pathology review
Human development days 1-4
Human development days 4-7
Human development week 2
Human development week 3
Autosomal trisomies: Pathology review
Miscellaneous genetic disorders: Pathology review
Necrosis and apoptosis
Inflammation
Pharmacokinetics: Drug absorption and distribution
Pharmacokinetics: Drug metabolism
Pharmacokinetics: Drug elimination and clearance
Sympathomimetics: Direct agonists
Muscarinic antagonists
Cholinomimetics: Direct agonists
Cholinomimetics: Indirect agonists (anticholinesterases)
Sympatholytics: Alpha-2 agonists
Adrenergic antagonists: Presynaptic
Adrenergic antagonists: Alpha blockers
Adrenergic antagonists: Beta blockers
Medication overdoses and toxicities: Pathology review
Development of the cardiovascular system
Fetal circulation
Pressures in the cardiovascular system
Measuring cardiac output (Fick principle)
Action potentials in myocytes
Action potentials in pacemaker cells
Excitability and refractory periods
Cardiac excitation-contraction coupling
ECG basics
ECG rate and rhythm
ECG intervals
ECG QRS transition
ECG axis
ECG normal sinus rhythm
Acyanotic congenital heart defects: Pathology review
Cyanotic congenital heart defects: Pathology review
Peripheral artery disease: Pathology review
Valvular heart disease: Pathology review
Cardiomyopathies: Pathology review
Supraventricular arrhythmias: Pathology review
Ventricular arrhythmias: Pathology review
Heart blocks: Pathology review
Endocarditis: Pathology review
Shock: Pathology review
Calcium channel blockers
Class I antiarrhythmics: Sodium channel blockers
Class II antiarrhythmics: Beta blockers
Class III antiarrhythmics: Potassium channel blockers
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Pharyngeal arches, pouches, and clefts
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Vitamin D
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Development of the face and palate
Optic pathways and visual fields
Auditory transduction and pathways
Vestibular transduction
Vestibulo-ocular reflex and nystagmus
Taste and the tongue
Eye conditions: Retinal disorders: Pathology review
Platelet plug formation (primary hemostasis)
Coagulation (secondary hemostasis)
Role of Vitamin K in coagulation
Clot retraction and fibrinolysis
Heme synthesis disorders: Pathology review
Coagulation disorders: Pathology review
Platelet disorders: Pathology review
Mixed platelet and coagulation disorders: Pathology review
Thrombosis syndromes (hypercoagulability): Pathology review
Anticoagulants: Heparin
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Thymus histology
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Introduction to the immune system
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Innate immune system
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T-cell development
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MHC class I and MHC class II molecules
T-cell activation
B-cell activation, differentiation, and contraction
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VDJ rearrangement
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B- and T-cell memory
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Vaccinations
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Immunodeficiencies: T-cell and B-cell disorders: Pathology review
Immunodeficiencies: Combined T-cell and B-cell disorders: Pathology review
Immunodeficiencies: Phagocyte and complement dysfunction: Pathology review
Glucocorticoids
Acneiform skin disorders: Pathology review
Papulosquamous and inflammatory skin disorders: Pathology review
Vesiculobullous and desquamating skin disorders: Pathology review
Skin cancer: Pathology review
Cartilage structure and growth
Neuromuscular junction and motor unit
Sliding filament model of muscle contraction
Slow twitch and fast twitch muscle fibers
Muscle contraction
Back pain: Pathology review
Rheumatoid arthritis and osteoarthritis: Pathology review
Seronegative and septic arthritis: Pathology review
Gout and pseudogout: Pathology review
Systemic lupus erythematosus (SLE): Pathology review
Scleroderma: Pathology review
Sjogren syndrome: Pathology review
Bone disorders: Pathology review
Bone tumors: Pathology review
Myalgias and myositis: Pathology review
Neuromuscular junction disorders: Pathology review
Acetaminophen (Paracetamol)
Non-steroidal anti-inflammatory drugs
Opioid agonists, mixed agonist-antagonists and partial agonists
Antigout medications
Osteoporosis medications
Development of the nervous system
Central nervous system histology
Peripheral nervous system histology
Neuron action potential
Cerebral circulation
Blood brain barrier
Cerebrospinal fluid
Ascending and descending spinal tracts
Motor cortex
Pyramidal and extrapyramidal tracts
Muscle spindles and golgi tendon organs
Spinal cord reflexes
Sensory receptor function
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Somatosensory pathways
Sympathetic nervous system
Adrenergic receptors
Parasympathetic nervous system
Cholinergic receptors
Enteric nervous system
Body temperature regulation (thermoregulation)
Hunger and satiety
Cerebellum
Basal ganglia: Direct and indirect pathway of movement
Memory
Sleep
Consciousness
Learning
Stress
Language
Emotion
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Congenital neurological disorders: Pathology review
Headaches: Pathology review
Seizures: Pathology review
Cerebral vascular disease: Pathology review
Traumatic brain injury: Pathology review
Spinal cord disorders: Pathology review
Dementia: Pathology review
Central nervous system infections: Pathology review
Movement disorders: Pathology review
Demyelinating disorders: Pathology review
Adult brain tumors: Pathology review
Pediatric brain tumors: Pathology review
Neurocutaneous disorders: Pathology review
Migraine medications
General anesthetics
Local anesthetics
Neuromuscular blockers
Anti-parkinson medications
Medications for neurodegenerative diseases
Opioid antagonists
Development of the renal system
Proximal convoluted tubule
Loop of Henle
Distal convoluted tubule
Sodium homeostasis
Potassium homeostasis
Osmoregulation
Antidiuretic hormone
Kidney countercurrent multiplication
Plasma anion gap
Congenital renal disorders: Pathology review
Renal tubular defects: Pathology review
Renal tubular acidosis: Pathology review
Acid-base disturbances: Pathology review
Electrolyte disturbances: Pathology review
Renal failure: Pathology review
Nephrotic syndromes: Pathology review
Nephritic syndromes: Pathology review
Urinary incontinence: Pathology review
Urinary tract infections: Pathology review
Kidney stones: Pathology review
Renal and urinary tract masses: Pathology review
Osmotic diuretics
Carbonic anhydrase inhibitors
Loop diuretics
Thiazide and thiazide-like diuretics
Potassium sparing diuretics
Development of the reproductive system
Menstrual cycle
Menopause
Disorders of sex chromosomes: Pathology review
Prostate disorders and cancer: Pathology review
Testicular tumors: Pathology review
Uterine disorders: Pathology review
Ovarian cysts and tumors: Pathology review
Cervical cancer: Pathology review
Vaginal and vulvar disorders: Pathology review
Benign breast conditions: Pathology review
Breast cancer: Pathology review
Complications during pregnancy: Pathology review
Congenital TORCH infections: Pathology review
Development of the respiratory system
Lung volumes and capacities
Anatomic and physiologic dead space
Alveolar surface tension and surfactant
Ventilation
Zones of pulmonary blood flow
Regulation of pulmonary blood flow
Pulmonary shunts
Ventilation-perfusion ratios and V/Q mismatch
Airflow, pressure, and resistance
Diffusion-limited and perfusion-limited gas exchange
Alveolar gas equation
Oxygen binding capacity and oxygen content
Oxygen-hemoglobin dissociation curve
Carbon dioxide transport in blood
Respiratory distress syndrome: Pathology review
Cystic fibrosis: Pathology review
Deep vein thrombosis and pulmonary embolism: Pathology review
Obstructive lung diseases: Pathology review
Restrictive lung diseases: Pathology review
Lung cancer and mesothelioma: Pathology review
Antihistamines for allergies
Bronchodilators: Beta 2-agonists and muscarinic antagonists
Bronchodilators: Leukotriene antagonists and methylxanthines

Transcript

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8 month old Emmanuel is brought to the clinic due to repeated episodes of jerking movements and loss of consciousness over the past few months. His parents are also worried because he feels limp when they lift him up, and his head tends to flop backward or to the side. On physical examination, you notice he has a flat face with a broad nasal bridge, and upon palpation of the abdomen, the liver appears enlarged. Right after him, 17 year old Arletta comes in. She complains that, recently, she has started to have difficulties seeing clearly at night. She also noticed that her skin is unusually dry, and doesn’t seem to improve with moisturizing cream. On physical examination, there are rough scaly patches of skin all over her body. You also notice that both her fourth toes are shorter than normal, and she tells you that they’ve been like that since birth. Finally, you see 32 year old George, who comes in with a 6 month history of progressive fatigue and weight loss. His wife has also recently noticed that, on occasion, he has been slurring his speech. On further questioning, George reluctantly tells you that he has experienced difficulties maintaining an erection. Examination reveals a low blood pressure, along with increased skin pigmentation, mostly around the oral mucosa, palmar creases, and knuckles.

Based on the initial presentation, Emmanuel, Arletta,, and George all seem to have some form of peroxisomal disorder. But first a bit of physiology real quick. Peroxisomes are cellular organelles that neutralize free radicals, which are molecules with an unpaired electron that can damage the cells by oxidizing lipids, proteins, and even the DNA. When free radicals enter peroxisomes, they get converted by an enzyme called oxidase into hydrogen peroxide or H2O2. But since hydrogen peroxide is still dangerous, there’s another enzyme, called catalase, which safely converts it into water and oxygen. Another thing catalase can do is use that hydrogen peroxide to break down toxic substances like ethanol and formaldehyde. That’s why you would expect liver cells to have more peroxisomes than most other cells in the body.

Peroxisomes also play an important role in two types of fatty acid oxidation: beta oxidation, where linear fatty acids called very long chain fatty acids, or VLCFAs for short, and medium chain fatty acids, or MCFAs for short, are chopped down into progressively smaller chains; and alpha oxidation, where branched chain fatty acids are broken down into linear ones, which can then undergo beta oxidation. For your exams, what’s important to know is that alpha oxidation takes place exclusively within peroxisomes, while beta oxidation can also occur in the mitochondria. It’s important to remember that peroxisomes are responsible for the beta oxidation of very long chain fatty acids, while mitochondria can only work with medium chain fatty acids. Now, the thing is that one of the byproducts of both alpha and beta oxidation is hydrogen peroxide, so catalase is used once again to convert it into water and oxygen.

Finally, peroxisomes are also involved in the breakdown of amino acids and production of cholesterol, bile salts, and plasmalogen, which is a phospholipid found particularly in the cell membrane of neurons.

Okay, now the first peroxisomal disorder is Zellweger syndrome. This is caused by a mutation in the PEX genes, which code for peroxins. For your exams, remember that Zellweger syndrome is autosomal recessive, meaning that an individual needs to inherit two copies of the mutated gene, one from each parent, to develop the condition. Normally, peroxins are proteins required for the formation of peroxisomes. Now, in Zellweger syndrome, peroxisomes can’t assemble, so the cells can’t break down VLCFAs, branched chain fatty acids, amino acids, and toxic substances like ethanol and formaldehyde. As a result, these end up building up in multiple organs and tissues, including facial tissues, the liver, and the nervous system. And that’s a high yield fact! At the same time, plasmalogens cannot be synthesized, which can further impair the function of the nervous system.

Signs and symptoms vary depending on the tissue affected. So, if that’s the facial tissues, there can be a flat face with epicanthal folds, broad nasal bridge, and large anterior fontanelle. And these are usually apparent soon after birth. For your exams, another extremely high yield finding is hepatomegaly, meaning that the liver can become enlarged and sometimes cirrhotic or replaced by fibrous tissue. This can affect the liver’s ability to conjugate bilirubin, so the increased unconjugated bilirubin builds up in the blood, which leads to jaundice, or yellowing of the skin and sclera.

If the nervous system is affected, symptoms may include muscle weakness, seizures, vision or hearing loss, along with hypotonia or reduced muscle tone, and hyporeflexia or diminished deep tendon reflexes. In a test question, these babies are usually described as “floppy” or looking like rag dolls, meaning that they feel limp when they are picked up, and can’t control their head and neck muscles, so their heads will tilt forward, backward or to the side, while their arms and legs will hang down. Over time, this can progress to severe breathing and feeding difficulties, which, if left untreated, can progress to death within the first few years of life.

Diagnosis of Zellweger syndrome starts with blood tests showing elevated VLCFAs levels, and is confirmed via genetic testing of the PEX genes. Unfortunately, no cure for the disease is currently available.

Next is Refsum disease, which is an autosomal recessive disorder caused by a mutation in the PHYH gene coding for phytanoyl-CoA hydroxylase. This enzyme is normally involved in the alpha oxidation of a branched chain fatty acid called phytanic acid, which turns it into pristanic acid. So without this enzyme, phytanic acid accumulates primarily in the nervous system, the retina, the skin, and the bones. Now, common neurological symptoms include ataxia or difficulty with coordination and movement, as well as peripheral neuropathy, which can manifest as burning, tingling, prickling, and pain in the hands and feet. Damage to the olfactory nerve can also result in anosmia or loss of smell, while damage to the acoustic nerve can cause impaired hearing and tinnitus. As for the eyes, what you need to know is that Refsum disease is associated with cataracts, which refers to the clouding or opacification of the lens, as well as retinitis pigmentosa. This is named after the pattern of spicule-shaped dark spots and blotches that are visible around the macula of the retina on a fundoscopic exam. An extremely high-yield fact is that the earliest symptoms of retinitis pigmentosa is night blindness and peripheral vision loss and, in late stages, goes on to affect central vision.

Sources

  1. "Robbins Basic Pathology" Elsevier (2017)
  2. "Harrison's Principles of Internal Medicine, Twentieth Edition (Vol.1 & Vol.2)" McGraw-Hill Education / Medical (2018)
  3. "Biochemistry of Mammalian Peroxisomes Revisited" Annual Review of Biochemistry (2006)
  4. "Peroxisomal disorders: The single peroxisomal enzyme deficiencies" Biochimica et Biophysica Acta (BBA) - Molecular Cell Research (2006)
  5. "Peroxisome biogenesis disorders" Biochimica et Biophysica Acta (BBA) - Molecular Cell Research (2006)
  6. "The PEX Gene Screen: molecular diagnosis of peroxisome biogenesis disorders in the Zellweger syndrome spectrum" Molecular Genetics and Metabolism (2004)
  7. "The Metabolic & Molecular Bases of Inherited Disease" New York ; Montreal : McGraw-Hill (2001)
  8. "Mutational Analyses on X-Linked Adrenoleukodystrophy Reveal a Novel Cryptic Splicing and Three Missense Mutations in the ABCD1 Gene" Pediatric Neurology (2013)