Immunodeficiencies: T-cell and B-cell disorders: Pathology review

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Immunodeficiencies: T-cell and B-cell disorders: Pathology review

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Mucopolysaccharide storage disease type 1 (Hurler syndrome) (NORD)
DNA cloning
ELISA (Enzyme-linked immunosorbent assay)
Fluorescence in situ hybridization
Gel electrophoresis and genetic testing
Karyotyping
Polymerase chain reaction (PCR) and reverse-transcriptase PCR (RT-PCR)
Acid-base map and compensatory mechanisms
Buffering and Henderson-Hasselbalch equation
Physiologic pH and buffers
The role of the kidney in acid-base balance
Metabolic acidosis
Plasma anion gap
Respiratory acidosis
Metabolic alkalosis
Respiratory alkalosis
Anaphylaxis
Food allergy
Type I hypersensitivity
Autoimmune hemolytic anemia
Goodpasture syndrome
Graves disease
Hemolytic disease of the newborn
Myasthenia gravis
Pemphigus vulgaris
Rheumatic heart disease
Type II hypersensitivity
Poststreptococcal glomerulonephritis
Serum sickness
Systemic lupus erythematosus
Type III hypersensitivity
Graft-versus-host disease
Type IV hypersensitivity
Isolated primary immunoglobulin M deficiency
Selective immunoglobulin A deficiency
X-linked agammaglobulinemia
Adenosine deaminase deficiency
Hyper IgM syndrome
Wiskott-Aldrich syndrome
Complement deficiency
Cytomegalovirus infection after transplant (NORD)
Chronic granulomatous disease
Leukocyte adhesion deficiency
DiGeorge syndrome
Glucocorticoids
T-cell development
B-cell development
MHC class I and MHC class II molecules
T-cell activation
B-cell activation, differentiation, and contraction
Cell-mediated immunity of CD4 cells
Cell-mediated immunity of natural killer and CD8 cells
Antibody classes
Contracting the immune response and peripheral tolerance
B- and T-cell memory
Vaccinations
Cytokines
Complement system
Innate immune system
Atrophy, aplasia, and hypoplasia
Hyperplasia and hypertrophy
Metaplasia and dysplasia
Oncogenes and tumor suppressor genes
Endocarditis
Myocarditis
Cardiac tumors
Myocardial infarction
Familial hypercholesterolemia
Hypertriglyceridemia
Cushing syndrome
Hypertension
Pheochromocytoma
Polycystic kidney disease
Renal artery stenosis
Lymphedema
Peripheral artery disease
Nutcracker syndrome
Superior mesenteric artery syndrome
Angiosarcomas
Human herpesvirus 8 (Kaposi sarcoma)
Vascular tumors
Behcet's disease
Kawasaki disease
Deep vein thrombosis
Thrombophlebitis
Adrenal cortical carcinoma
Hyperaldosteronism
Primary adrenal insufficiency
Waterhouse-Friderichsen syndrome
Congenital adrenal hyperplasia
Multiple endocrine neoplasia
Carcinoid syndrome
Neuroblastoma
Zollinger-Ellison syndrome
Hyperprolactinemia
Pituitary adenoma
Prolactinoma
Growth hormone deficiency
Hypopituitarism
Hypoprolactinemia
Diabetes insipidus
Syndrome of inappropriate antidiuretic hormone secretion (SIADH)
Hyperthyroidism
Thyroid storm
Toxic multinodular goiter
Hashimoto thyroiditis
Hypothyroidism
Postpartum thyroiditis
Thyroid cancer
Adrenal insufficiency: Pathology review
Adrenal masses: Pathology review
Cushing syndrome and Cushing disease: Pathology review
Diabetes insipidus and SIADH: Pathology review
Diabetes mellitus: Pathology review
Hyperthyroidism: Pathology review
Hypopituitarism: Pathology review
Hypothyroidism: Pathology review
Multiple endocrine neoplasia: Pathology review
Parathyroid disorders and calcium imbalance: Pathology review
Pituitary tumors: Pathology review
Thyroid nodules and thyroid cancer: Pathology review
Hyperparathyroidism
Hypoparathyroidism
Biliary colic
Alcohol-associated liver disease
Alpha 1-antitrypsin deficiency
Autoimmune hepatitis
Benign liver tumors
Cirrhosis
Hemochromatosis
Viral hepatitis
Hepatocellular carcinoma
Jaundice
Neonatal hepatitis
Non-alcoholic fatty liver disease
Portal hypertension
Primary biliary cholangitis
Primary sclerosing cholangitis
Reye syndrome
Wilson disease
Acute pancreatitis
Chronic pancreatitis
Glucose-6-phosphate dehydrogenase (G6PD) deficiency
Sickle cell disease (NORD)
Folate (Vitamin B9) deficiency
Vitamin B12 deficiency
Alpha-thalassemia
Anemia of chronic disease
Beta-thalassemia
Iron deficiency anemia
Sideroblastic anemia
Aplastic anemia
Mastocytosis (NORD)
Essential thrombocythemia (NORD)
Myelodysplastic syndromes
Myelofibrosis (NORD)
Polycythemia vera (NORD)
Acute leukemia
Chronic leukemia
Hodgkin lymphoma
Non-Hodgkin lymphoma
Disseminated intravascular coagulation
Heparin-induced thrombocytopenia
Von Willebrand disease
Waldenstrom macroglobulinemia
Hemolytic-uremic syndrome
Thrombotic thrombocytopenic purpura
Antithrombin III deficiency
Factor V Leiden
Protein C deficiency
Stevens-Johnson syndrome
Candida
Human herpesvirus 6 (Roseola)
Measles virus
Parvovirus B19
Rubella virus
Varicella zoster virus
Coxsackievirus
Herpes simplex virus
Human papillomavirus
Ankylosing spondylitis
Gout
Rheumatoid arthritis
Septic arthritis
Osteoarthritis
Limited systemic sclerosis (CREST syndrome)
Raynaud phenomenon
Scleroderma
Sjogren syndrome
Pleural effusion
Blood groups and transfusions
Platelet plug formation (primary hemostasis)
Coagulation (secondary hemostasis)
Clot retraction and fibrinolysis
Role of Vitamin K in coagulation
Amino acids and protein folding
Cell cycle
DNA damage and repair
DNA mutations
DNA replication
DNA structure
Epigenetics
Gene regulation
Mitosis and meiosis
Nuclear structure
Nucleotide metabolism
Transcription of DNA
Translation of mRNA
Cell membrane
Cell signaling pathways
Cell-cell junctions
Cellular structure and function
Endocytosis and exocytosis
Nernst equation
Osmosis
Acute intermittent porphyria
Anticoagulants: Direct factor inhibitors
Anticoagulants: Heparin
Anticoagulants: Warfarin
Anti-tumor antibiotics
DNA alkylating medications
Monoclonal antibodies
Ribonucleotide reductase inhibitors
Topoisomerase inhibitors
Blood components
Erythropoietin
Bacillus anthracis (Anthrax)
Bacillus cereus (Food poisoning)
Corynebacterium diphtheriae (Diphtheria)
Listeria monocytogenes
Clostridium botulinum (Botulism)
Clostridium difficile (Pseudomembranous colitis)
Clostridium perfringens
Clostridium tetani (Tetanus)
Actinomyces israelii
Nocardia
Staphylococcus aureus
Staphylococcus epidermidis
Staphylococcus saprophyticus
Streptococcus agalactiae (Group B Strep)
Streptococcus pneumoniae
Streptococcus pyogenes (Group A Strep)
Streptococcus viridans
Enterococcus
Bacteroides fragilis
Bartonella henselae (Cat-scratch disease and Bacillary angiomatosis)
Enterobacter
Escherichia coli
Klebsiella pneumoniae
Legionella pneumophila (Legionnaires disease and Pontiac fever)
Proteus mirabilis
Pseudomonas aeruginosa
Salmonella (non-typhoidal)
Salmonella typhi (typhoid fever)
Serratia marcescens
Shigella
Yersinia enterocolitica
Yersinia pestis (Plague)
Campylobacter jejuni
Helicobacter pylori
Vibrio cholerae (Cholera)
Moraxella catarrhalis
Neisseria gonorrhoeae
Neisseria meningitidis
Bordetella pertussis (Whooping cough)
Brucella
Francisella tularensis (Tularemia)
Haemophilus ducreyi (Chancroid)
Haemophilus influenzae
Pasteurella multocida
Mycobacterium tuberculosis (Tuberculosis)
Mycobacterium avium complex (NORD)
Mycobacterium leprae
Chlamydia pneumoniae
Chlamydia trachomatis
Gardnerella vaginalis (Bacterial vaginosis)
Mycoplasma pneumoniae
Coxiella burnetii (Q fever)
Ehrlichia and Anaplasma
Rickettsia rickettsii (Rocky Mountain spotted fever) and other Rickettsia species
Borrelia burgdorferi (Lyme disease)
Borrelia species (Relapsing fever)
Leptospira
Treponema pallidum (Syphilis)
Adenovirus
Hepatitis B and Hepatitis D virus
Epstein-Barr virus (Infectious mononucleosis)
BK virus (Hemorrhagic cystitis)
JC virus (Progressive multifocal leukoencephalopathy)
Prions (Spongiform encephalopathy)
Norovirus
Hepatitis C virus
West Nile virus
Yellow fever virus
Zika virus
Influenza virus
Human parainfluenza viruses
Mumps virus
Respiratory syncytial virus
Hepatitis A and Hepatitis E virus
Poliovirus
Rhinovirus
Rotavirus
HIV (AIDS)
Rabies virus
PDE5 inhibitors
Protease inhibitors
Cell wall synthesis inhibitors: Cephalosporins
Serotonin and norepinephrine reuptake inhibitors
Cell wall synthesis inhibitors: Penicillins
Monoamine oxidase inhibitors
Non-hemolytic normocytic anemia: Pathology review
Intrinsic hemolytic normocytic anemia: Pathology review
Extrinsic hemolytic normocytic anemia: Pathology review
Warm autoimmune hemolytic anemia and cold agglutinin (NORD)
Anemia of chronic disease: Year of the Zebra
Myeloproliferative disorders: Pathology review
Leukemias: Pathology review
Coagulation disorders: Pathology review
Mixed platelet and coagulation disorders: Pathology review
Platelet disorders: Pathology review
Plasma cell disorders: Pathology review
Antiplatelet medications
Thrombolytics
Hematopoietic medications
Methemoglobinemia
Pulmonary edema
Pulmonary embolism
Pulmonary shunts
Ventilation
Prerenal azotemia
Postrenal azotemia
Renal azotemia
Hyperkalemia
Hypermagnesemia
Hypercalcemia
Hypernatremia
Hypokalemia
Hyponatremia
Amyloidosis
Vitamin D
Antidiuretic hormone
Sodium homeostasis
Renin-angiotensin-aldosterone system
Parkinson disease
Immunodeficiencies: Combined T-cell and B-cell disorders: Pathology review
Immunodeficiencies: T-cell and B-cell disorders: Pathology review
Thyroid and parathyroid gland histology
Adrenal hormone synthesis inhibitors
Mineralocorticoids and mineralocorticoid antagonists
Hypoglycemics: Insulin secretagogues
Insulins
Miscellaneous hypoglycemics
Cortisol
Synthesis of adrenocortical hormones
Parathyroid hormone
Calcitonin
Phosphate, calcium and magnesium homeostasis
Adrenocorticotropic hormone
Growth hormone and somatostatin
Oxytocin and prolactin
Thyroid hormones
Celiac disease
Purine and pyrimidine synthesis and metabolism disorders: Pathology review
Bacterial structure and functions
Herpesvirus medications
Hepatitis medications
Trypanosoma cruzi (Chagas disease)
Plasmodium species (Malaria)

Transcript

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Gaia, a 6 year old girl, is brought to the clinic by her parents because she’s been having diarrhea and abdominal cramps for the past few weeks.

When you ask about her clinical history, her parents tell you that Gaia was diagnosed with celiac disease a few years back; however, they point out that she's stopped consuming any food products that may contain gluten altogether.

You decide to first run stool tests, which reveal the presence of the parasite giardia lamblia.

In addition, Gaia’s parents tell you that she has a history of asthma and allergic rhinitis, so you also order an immunoglobulin test, which shows low IgA and increased IgE levels in her blood.

Next comes Joe, a 10 year old boy that’s brought to the clinic because he fell and broke his arm.

Upon physical examination, you notice a red, weeping rash on his scalp.

You also notice that there’s a skin abscess on his leg that lacks any surrounding warmth and redness.

Joe’s parents tell you that he develops abscesses like that all the time.

You order an immunoglobulin test for Joe too, which reveals increased IgE but normal IgA levels.

Based on the initial presentation, both cases seem to have some form of immunodeficiency, meaning that their immune system's ability to fight pathogens is compromised.

Immunodeficiencies can be classified according to the cell of the immune system that is defective, into B cell and T cell disorders, which respectively lead to a deficiency in humoral or antibody-mediated and cell-mediated immune responses.

Let’s begin with B cell disorders, starting with Bruton or X-linked agammaglobulinemia, or XLA for short.

This is caused by a mutation in the BTK gene, which is found on the X chromosome.

XLA is an X-linked recessive condition, so it almost exclusively manifests in biological males because they have only one X chromosome.

On the other hand, biological females have two X chromosomes, so even if they have a defective BTK gene on one chromosome, they still have another functional one.

Now, the BTK gene codes for an enzyme called Bruton’s tyrosine kinase or BTK, which has an important role in the maturation process of the B cells at the bone marrow.

Normally, once B cells are mature and ready, they can migrate from the bone marrow to the spleen, where they’re exposed to antigens, and finally move into the blood or lymph and become an antibody-secreting plasma cell.

With XLA, though, there’s a mutation in the BTK gene that makes the BTK enzyme ineffective.

As a result, the B cell maturation process stops at the bone marrow, so these B cells can't leave it to become plasma cells.

Ultimately, people with XLA completely lack or have far fewer circulating B cells, so they also lack circulating antibodies of all classes.

The end result is a deficiency of B cell and antibody-mediated immunity.

Symptoms of XLA are typically absent until after 6 months of age, which is when they run out of the mother’s supply of immunoglobulins that they received through the placenta during pregnancy.

And that’s a very high yield concept to keep in mind!

Now, after 6 months of age, children with XLA become very susceptible to recurrent infections.

For your exams, remember that these infections are typically caused by encapsulated bacteria, so Streptococcus pneumoniae, Neisseria meningitidis, Klebsiella, Haemophilus influenzae, and Pseudomonas aeruginosa.

Most often, these bacterial infections affect the respiratory tract, causing sinusitis, otitis media, pharyngitis, bronchitis, and pneumonia.

Less commonly, children with XLA may also get viral infections, especially from enteroviruses like polio and coxsackievirus, as well as protozoal infections from intestinal parasites like giardia lamblia.

Having said that, it’s important to remember that T-cell mediated immunity remains intact, and some viral, fungal, and protozoal infections can still be cleared.

Another high yield fact is that these individuals must avoid live attenuated vaccines, like the live polio vaccine, because the lack of antibodies makes even certain weakened pathogens tough to destroy.

Diagnosis typically begins with a physical examination, where lymph nodes and tonsils are diminished in size.

For your exams, remember that this is known as lymphoid hypoplasia, and is due to the lack of primary follicles and germinal centers, which are normally the B cell compartments in healthy lymphoid tissues.

The next step for diagnosis involves blood tests revealing the complete absence of B cells, as well as decreased levels of all immunoglobulin classes.

Finally, diagnosis can be confirmed through genetic tests looking for the mutated BTK gene.

Treatment for XLA includes lifelong intravenous infusion of immunoglobulins, and if there is a bacterial infection, these individuals should be started on antibiotics right away.

Next up, selective IgA deficiency is the most common and least serious immunodeficiency.

Though the exact mutation is unknown, the end result is a failure of IgA-producing B cells to mature into plasma cells.

As a result, these individuals have low levels of IgA, which is normally the main antibody protecting the mucous membranes lining the respiratory and gastrointestinal tracts.

However, what's important to keep in mind is that the production of other antibodies isn’t affected.

For that reason, most children with selective IgA deficiency have no symptoms, but some of them may have an increased tendency to develop recurrent infections involving the respiratory or gastrointestinal tracts.

A high yield gastrointestinal pathogen is the parasite giardia lamblia, which is responsible for a diarrheal condition known as giardiasis.

In addition, there’s an increased frequency of atopy, mainly manifesting as asthma, rhinitis, and dermatitis, as well as autoimmune diseases like rheumatoid arthritis and celiac disease, although the link between them is not fully understood.

Finally, some individuals develop severe anaphylactic reactions when they’re transfused with blood containing IgA, because the IgA is recognized like a foreign antigen and attacked by the immune system.

Diagnosis is based on blood tests showing low IgA levels, normal levels of IgM and IgG, and sometimes, increased IgE.

There’s no specific treatment for selective IgA deficiency.

The last B cell disorder you should know for your exams is common variable immunodeficiency, or CVID for short.

Now, the exact mutation that causes CVID remains largely unknown, but it is thought to result from a combination of several mutations that ultimately make mature B cells unable to differentiate into antibody-producing plasma cells.

For your exams, it’s important not to confuse this with X-linked agammaglobulinemia, where there’s an absence of mature B cells altogether.

As the name suggests, symptoms tend to vary a lot.

Most often, they first appear during puberty or early adulthood, and include recurrent infections, mainly of the respiratory tract.

Over time, if these infections are not properly treated, they can lead to the development of bronchiectasis, meaning their bronchi become abnormally enlarged.

And that’s a high yield fact!

In addition, for unknown reasons, individuals with CVID are at an increased risk of developing malignancies, especially lymphomas, as well as autoimmune conditions like autoimmune anemia, thrombocytopenia, or arthritis.

For diagnosis, what you must know is that laboratory tests demonstrate an overall decrease in plasma cells and immunoglobulins.

Also, it’s important to note that genetic testing can’t confirm the diagnosis of CVID, but it can be useful to rule out similar conditions, such as X-linked agammaglobulinemia.

Treatment for CVID includes lifelong intravenous infusion of immunoglobulins.

In addition, individuals with autoimmune conditions may require immunosuppressive treatment with corticosteroids, while recurrent bacterial infections can be treated with antibiotics.

Okay, next are T cell disorders.

Let’s start from a very high yield disease, which is 22q11.2 deletion syndrome, also called thymic aplasia.

If these names don’t ring a bell, you probably know it as DiGeorge syndrome, which is in fact one presentation of 22q11.2 deletion syndrome along with velocardiofacial syndrome.

Now, 22q11.2 deletion syndrome is an autosomal dominant condition where the q11.2 portion of DNA on chromosome 22 is deleted, and this region encodes for some really important genes, one of which is the TBX1 gene.

Now, TBX1 gene is involved in normal embryonic development of the pharyngeal pouches, which are fetal structures that develop into parts of the head and neck.

More specifically, for your exams you should know that the ones affected are the third pharyngeal pouch, which goes on to develop into the thymus and the inferior parathyroid glands, as well as the fourth pouch, which goes on to develop into the superior parathyroid glands.

So with a 22q11.2 deletion and therefore no TBX1 gene, the thymus and parathyroid gland both end up hypoplastic, meaning that they are underdeveloped.

And that’s a high yield fact!

Now, parathyroid gland hypoplasia leads to low levels of parathyroid hormone, which causes hypocalcemia or low levels of calcium in blood, and this can manifest as osteoporosis and tetany, or involuntary contraction of mus

On the other hand, thymic hypoplasia results in a T cell disorder, since the thymus is where T cells mature.

As a result, these individuals are more susceptible to recurrent infections.

Often within 6 months of age, infants begin having recurrent or severe infections from common viruses like Varicella zoster virus, or opportunistic fungi like Candida albicans and Pneumocystis jiroveci, and bacteria like nontuberculous Mycobacteria.

Sources

  1. "Robbins Basic Pathology" Elsevier (2017)
  2. "Harrison's Principles of Internal Medicine, Twentieth Edition (Vol.1 & Vol.2)" McGraw-Hill Education / Medical (2018)
  3. "Analysis of Clinical Presentations of Bruton Disease: A Review of 20 Years of Accumulated Data from Pediatric Patients at Severance Hospital" Yonsei Medical Journal (2008)
  4. "Allergy and Asthma: Practical Diagnosis and Management" McGraw Hill Professional (2007)
  5. "Selective IgA deficiency (SIgAD) and common variable immunodeficiency (CVID)" Clinical and Experimental Immunology (2000)
  6. "Long-term follow-up of health in blood donors with primary selective IgA deficiency" Journal of Clinical Immunology (1996)